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berkeley_reactor_200306_planktonic_scaffold_69065_16

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(24898..25389)

Top 3 Functional Annotations

Value Algorithm Source
UPF0234 protein Cpin_6212 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI56_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 163.0
  • Bit_score: 221
  • Evalue 5.70e-55
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 163.0
  • Bit_score: 221
  • Evalue 1.60e-55
UPF0234 protein Cpin_6212 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 163.0
  • Bit_score: 221
  • Evalue 8.00e-55

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 492
ATGCCTTCATTTGACATTGCCAGCAAAGTAGATCTGCAAACACTCGATAATACCATCAACGTAGTAAAGAAAGAGATTTCCGGCCGCTTTGATTTTAAAGGCTCGCATGTAGAGATCGACCTGGATAAGAAAACCCTGGTGCTGAAACTCGAAGTGGAGAGCGATATGAAACTGAAGCAGGTGGAAGATGTGATCATCTCCAAATCGCTCAAGCAGGGATTGGATGCCAAATCGTTCGACTTCAGCAAGGATCATTACATTTCCGGTAAGTTTGTTCGTAAAGAAATCTCGGTGCGTAACGGTCTCGATAAAGATGCGGCCAAGAAAATCGTAAAGCTGATCAAAGACAGCGGGCTGAAGGTGCAGGCGGCTATTATGGATGATATTATCCGGGTTACCGGCAAAAAGATCGACGACCTGCAGGACGTGATCAAACTGTGTAACGGCGCCGCGCTGGACATGCCGCTGCAATATGTAAACATGAAAAGCTAA
PROTEIN sequence
Length: 164
MPSFDIASKVDLQTLDNTINVVKKEISGRFDFKGSHVEIDLDKKTLVLKLEVESDMKLKQVEDVIISKSLKQGLDAKSFDFSKDHYISGKFVRKEISVRNGLDKDAAKKIVKLIKDSGLKVQAAIMDDIIRVTGKKIDDLQDVIKLCNGAALDMPLQYVNMKS*