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berkeley_reactor_200306_planktonic_scaffold_82142_39

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(41416..43437)

Top 3 Functional Annotations

Value Algorithm Source
UvrABC system protein B n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PH61_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 680.0
  • Bit_score: 1086
  • Evalue 0.0
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 680.0
  • Bit_score: 1086
  • Evalue 0.0
excinuclease ABC subunit B similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 680.0
  • Bit_score: 1086
  • Evalue 0.0

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2022
ATGTTTAAGATAGAACGACCATATCCACCCGCCGGCGATCAGCCATCCGCCATCCGGCAATTGAGCGAGGGCATTATTGACGGGGAAAAGTTCCAGACCCTGCTTGGGGTAACCGGTTCCGGTAAGACCTTTACCATGGCCAATATCATCCAGGAGGTGCAGAAACCTACCCTGGTGCTTACACATAACAAAACACTGGTAGCCCAGCTCTATGGCGAGTTCCGGCAGTTTTTTCCCGACAATGCCGTCGAGTATTTCGTGTCTTACTACGACTACTATCAGCCCGAGGCTTATATGCCGGTAAGCGATACCTATATCGAAAAAGACCTGGCCATCAATGAAGAGCTGGAGAAGCTGCGCCTGCGTACTACGACCAACCTGTTGAGCGGCCGGCGCGATATACTGGTGGTGGCCTCGGTATCCTGTATCTATGGTATGGGTAACCCTACCGAATACGAAAACGGGATTATCCGGATCAATACCGGCGATAATGTACCCCGCAACGCATTCCTCCATAGCCTGGTCAACTCGCTGTACAACCGCAGCCAGGGCGACTTTACCCGCGGTACCTTCCGCGTAAAGGGCGATACGGTAGATATTAACCTCCCTTATGTCGACTATGGTTACCGGGTTACCTTTTTCGGCGACGAGATCGAGGAGATCGAAAGCTTCGAAATAGAGTCCGGCAAAAGGATCGGGAAAATGACCAATGCCGCTATATTCCCGGCTAACCTGTATATGGCGCCTAAAGACCAGATGGCGCAGATCATCCGCGATATCCAGGATGAGATGACGGCCCAGGTCAACTATTTTAAAAGCATCGGCAAGCATATCGAAGCGCAACGCATCAAGGAGCGCGTGAGTTATGATATCGAGATGATCCAGGAACTGGGTTATTGCAGTGGTATCGAAAATTACTCCCGCTTTCTCGACCGCCGCACGCCCGGTACACGCCCTTTCTGCCTGATCGATTATTTTCCCAAAGACTTCCTGTTGTTCGTGGACGAAAGCCATGCCACCATACCGCAGATCAGCGGTATGTACGGCGGCGACCGGTCGCGCAAGCTGAACCTGGTCGACTTTGGTTTCCGCTTGCCCTCGGCACTGGATAACCGTCCGCTGAATTTTTACGAGTTCGAGACCCTACTCAACCAGACCGTATTTGTAAGCGCTACACCTGCGGCTTATGAACTCGACCAGTCCGAAGGGGTGGTGGTAGAACAGGTAGTACGGCCTACGGGGCTTTTGGATCCGCCGATCGAGATCCGGCCTTCGGTCAACCAGATCGACGACCTGCTCGAAGAGATAGACAAGCGGATCAAAATGGGCGACCGTGTACTGGTAACCACGCTGACCAAACGCATGTCGGAAGAGCTGGATAAATACCTGCAACGGATCAATATCAACTCCCGATACATCCACTCCGAAGTAGATACCCTGGAACGCGTAGAGATACTCCGCAACCTCCGGCTGGGCAATATCGACGTACTGGTCGGCGTTAACCTCCTGAGGGAAGGGCTCGATCTGCCCGAAGTATCGCTGGTAGCGATACTGGATGCCGATAAGGAAGGCTTCCTGCGCGATGAACGCTCCCTGACCCAGATGGCGGGCCGTGCAGCACGTAACGTGGACGGCCTGGTTATTTTCTATGCCGATAAGATTACGGAAAGCATGCAGCGCACGATGGATGAAACCGGCAGGCGCAGGGAAAAACAAGTCGCGTATAATAAAGAACATGGTATCATTCCGGCCACCGTACGCAAATCGGTAGACCAGATACTGAAACAGACTTCGGTGCTGGATATTAAAGGATATGACGAAGACAGCGACCTGGCAGCACCGGAACTGGTGAACGTAGCCGCAGAAGAGGATGTGGAATACCTGAGCAAACCGCAACTGGAAAAAGCAATAGCCCAAACGAAGAAAGAAATGGAAAAAGCCGCCAAAGACCTCGACTTTATGGAAGCGGCCAGGCTGCGTGATAAAATGTTTGGTCTGCAAAAGACCCTGGAGGGCCTGTAA
PROTEIN sequence
Length: 674
MFKIERPYPPAGDQPSAIRQLSEGIIDGEKFQTLLGVTGSGKTFTMANIIQEVQKPTLVLTHNKTLVAQLYGEFRQFFPDNAVEYFVSYYDYYQPEAYMPVSDTYIEKDLAINEELEKLRLRTTTNLLSGRRDILVVASVSCIYGMGNPTEYENGIIRINTGDNVPRNAFLHSLVNSLYNRSQGDFTRGTFRVKGDTVDINLPYVDYGYRVTFFGDEIEEIESFEIESGKRIGKMTNAAIFPANLYMAPKDQMAQIIRDIQDEMTAQVNYFKSIGKHIEAQRIKERVSYDIEMIQELGYCSGIENYSRFLDRRTPGTRPFCLIDYFPKDFLLFVDESHATIPQISGMYGGDRSRKLNLVDFGFRLPSALDNRPLNFYEFETLLNQTVFVSATPAAYELDQSEGVVVEQVVRPTGLLDPPIEIRPSVNQIDDLLEEIDKRIKMGDRVLVTTLTKRMSEELDKYLQRININSRYIHSEVDTLERVEILRNLRLGNIDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRDERSLTQMAGRAARNVDGLVIFYADKITESMQRTMDETGRRREKQVAYNKEHGIIPATVRKSVDQILKQTSVLDIKGYDEDSDLAAPELVNVAAEEDVEYLSKPQLEKAIAQTKKEMEKAAKDLDFMEAARLRDKMFGLQKTLEGL*