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berkeley_reactor_200306_planktonic_scaffold_89056_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(11615..12268)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VY14_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 212.0
  • Bit_score: 171
  • Evalue 9.00e-40
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 212.0
  • Bit_score: 171
  • Evalue 2.60e-40
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACT96915.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 212.0
  • Bit_score: 171
  • Evalue 1.30e-39

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 654
ATGGTAATAGCTATCGTAGATGACCACCGACTATTAACAGAAGCATTGAGCAATTGCCTGAAAAACAATGCAGAGCAGGTAGAAGACGTAATGATTTTTAATAATCCACAGTCTTTTATCGATTTGCTGGCAGGCGGCACCCACATCGACATCCTCTTTGTAGACCTATTAATGCCCCAAATGCAGGGTACAGAGGTAATCAGCAAATGCAGGCAGGCCAGGCATGGCATACCGAACCTTAAAATTATTGTCATGACCAGCGTCACCAACCCGCAGATGGTAAGACATGTATTAAGCATCGGGGCAAACGGCTACCTGACTAAGGATACCAGTCTTGAAGAACTCCGGCTGGCACTGGCCGAAGTGTACGAGGGTAACCAGTATATCGCTAAAACGATCGAAAAAAAACTACTGCGCTCCTTTATAACGGAAGAGCAGATCAACTTCTATCTGACCCCGAGAGAAACGCAGGTATTAGCTCATTTATGTAAAGCGAAAACGGTAAAAGAAATCGCCTATGAAATGCAGCTCAGCCTCCATACGGTGCTATCCTACCAAAAAAACATCATGCGAAAATTCAACATGAACCGGACCGTCGACCTGGTGGCATTTGCCATCGAACATGGTATTTATTCAGACACACACACTTCATAA
PROTEIN sequence
Length: 218
MVIAIVDDHRLLTEALSNCLKNNAEQVEDVMIFNNPQSFIDLLAGGTHIDILFVDLLMPQMQGTEVISKCRQARHGIPNLKIIVMTSVTNPQMVRHVLSIGANGYLTKDTSLEELRLALAEVYEGNQYIAKTIEKKLLRSFITEEQINFYLTPRETQVLAHLCKAKTVKEIAYEMQLSLHTVLSYQKNIMRKFNMNRTVDLVAFAIEHGIYSDTHTS*