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berkeley_reactor_200306_planktonic_scaffold_101710_59

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 66568..67275

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI000362A8B6 similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 229.0
  • Bit_score: 228
  • Evalue 3.90e-57
Uncharacterized protein {ECO:0000313|EMBL:KGO07454.1}; TaxID=1300343 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Dokdonia.;" source="Dokdonia donghaensis DSW-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 223.0
  • Bit_score: 228
  • Evalue 7.20e-57
radC; DNA repair protein RadC similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 236.0
  • Bit_score: 226
  • Evalue 7.20e-57

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Taxonomy

Dokdonia donghaensis → Dokdonia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 708
ATGGAAAAAGTGATTAAGCCGGAAAACATGAATGTAATTAAAAATTGGGCAGAAGATGAACGGCCAAGAGAGCGTCTGGCGATAAATGGAGCACAGGCCCTGTCGGATGCCGAGTTACTGGCGATCCTGATTCAATGCGGGACCAAAGATGTTTCTGCATTGGAGATCGCCCAGCAAATATTGCGCCGGGTTGATCATAACCTGGTTGCACTCAGCAAACTCTCGGCCAAGGAATTACAGGTTGTGAAAGGTATCGGGAGCGCGAAGGCAACAAAACTGGTAGCAGCCCTGGAGTTGGGCCGGCGGCGGCAAATGTACCGGAGCAATGAAAGGCCCAAACTTGCAAGCAGCAAAGATGCCGTTAACCTGTTGATGCCCGTGATGCAGGACCTGGCCAGGGAACATTTTTGTGTGCTTTGCCTTGGCCCCAACAATACCCTGTTACACCGGGAGTTTGCGAGCATAGGAGGTCTGACGAGTACAACCGTAGATCTGAAAGTAATTTTCAAAATTGCATTACAATATTCTGCGACCCGTATTATCGTAGCGCACAATCATCCATCCGGTAACCCGAAGCCAAGTAACTCCGACAAGCAGATCACGCAAAAATTACAGACGGGGGCCAAAGTACTCGATATGCAATTAATCGATCACATTATTATAGCCGATCGTCTTGCTTTTAGTTTTGCGGACGAAGGGCTGCTATAA
PROTEIN sequence
Length: 236
MEKVIKPENMNVIKNWAEDERPRERLAINGAQALSDAELLAILIQCGTKDVSALEIAQQILRRVDHNLVALSKLSAKELQVVKGIGSAKATKLVAALELGRRRQMYRSNERPKLASSKDAVNLLMPVMQDLAREHFCVLCLGPNNTLLHREFASIGGLTSTTVDLKVIFKIALQYSATRIIVAHNHPSGNPKPSNSDKQITQKLQTGAKVLDMQLIDHIIIADRLAFSFADEGLL*