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berkeley_reactor_200306_planktonic_scaffold_101710

Search features with annotation key words

Displaying items 1-30 of 184 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_101710_1
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1588..2505
DNA (918bp) protein (306aa)
Sulfate-transporting ATPase {ECO:0000313|EMBL:AEE51487.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEE51487.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Sulfate-transporting ATPase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYU5_HALH1
sulfate-transporting ATPase
berkeley_reactor_200306_planktonic_scaffold_101710_2
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2492..3256
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYU6_HALH1
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
berkeley_reactor_200306_planktonic_scaffold_101710_3
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3285..5051
DNA (1767bp) protein (589aa)
Beta-lactamase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L164_HALH1
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AEE52796.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
berkeley_reactor_200306_planktonic_scaffold_101710_4
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5088..6155
DNA (1068bp) protein (356aa)
Putative signal transduction histidine kinase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYU7_HALH1
signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEE51489.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
berkeley_reactor_200306_planktonic_scaffold_101710_5
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6145..6840
DNA (696bp) protein (232aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYU8_HALH1
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:AEE51490.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
berkeley_reactor_200306_planktonic_scaffold_101710_6
unknown

Not on your lists

7006..7446
DNA (441bp) protein (147aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_101710_7
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8406..8804)
DNA (399bp) protein (133aa)
Putative redox protein, regulator of disulfide bond formation n=1 Tax=Flavobacterium sp. CF136 RepID=J2IY71_9FLAO
Osmotically inducible protein OsmC {ECO:0000313|EMBL:KIA85805.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
OsmC family protein
berkeley_reactor_200306_planktonic_scaffold_101710_8
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8806..9699)
DNA (894bp) protein (298aa)
Pirin domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XU94_PEDHD
Pirin domain-containing protein
Pirin domain protein {ECO:0000313|EMBL:ACU05887.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
berkeley_reactor_200306_planktonic_scaffold_101710_9
unknown

Not on your lists

comp(10065..10475)
DNA (411bp) protein (137aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_101710_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10543..10980)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC00_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57628.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
berkeley_reactor_200306_planktonic_scaffold_101710_11
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10977..11342)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0PWP9_ELIME
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW65272.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
berkeley_reactor_200306_planktonic_scaffold_101710_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11530..12741
DNA (1212bp) protein (404aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phosphoglycerate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB38_NIAKG
phosphoglycerate kinase
berkeley_reactor_200306_planktonic_scaffold_101710_13
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13097..14242
DNA (1146bp) protein (382aa)
Outer membrane protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6E6R7_9SPHI
Outer membrane protein {ECO:0000313|EMBL:EDM38603.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
beta-lactamase fold-like Zn-dependent hydrolase
berkeley_reactor_200306_planktonic_scaffold_101710_14
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14517..15497)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037DD560
ABC transporter {ECO:0000313|EMBL:AHM58352.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
Fe(3+)-transporting ATPase
berkeley_reactor_200306_planktonic_scaffold_101710_15
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15540..15944)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EC57_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM36763.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
berkeley_reactor_200306_planktonic_scaffold_101710_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16061..16591)
DNA (531bp) protein (177aa)
DinB family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK43_NIAKG
DinB family protein
DinB family protein {ECO:0000313|EMBL:AEV96477.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
berkeley_reactor_200306_planktonic_scaffold_101710_17
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17046..18572)
DNA (1527bp) protein (509aa)
siroheme synthase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B5E29D
Uncharacterized protein {ECO:0000313|EMBL:KIC93930.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_101710_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18569..21361)
DNA (2793bp) protein (931aa)
TonB-denpendent receptor n=1 Tax=Spirosoma spitsbergense RepID=UPI00036A8104
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADB42102.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
berkeley_reactor_200306_planktonic_scaffold_101710_19
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21519..23183)
DNA (1665bp) protein (555aa)
Sulfite reductase (NADPH) {ECO:0000256|SAAS:SAAS00055561}; EC=1.8.1.2 {ECO:0000256|SAAS:SAAS00055561};; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003822D7B
sulfite reductase
berkeley_reactor_200306_planktonic_scaffold_101710_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23219..24913)
DNA (1695bp) protein (565aa)
NADPH--hemoprotein reductase {ECO:0000313|EMBL:AEW03202.1}; EC=1.6.2.4 {ECO:0000313|EMBL:AEW03202.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADPH--hemoprotein reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQF5_NIAKG
NADPH--hemoprotein reductase
berkeley_reactor_200306_planktonic_scaffold_101710_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24934..25740)
DNA (807bp) protein (269aa)
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:AEW03201.1}; EC=2.1.1.107 {ECO:0000313|EMBL:AEW03201.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Uroporphyrin-III C-methyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQF4_NIAKG
uroporphyrin-III C-methyltransferase
berkeley_reactor_200306_planktonic_scaffold_101710_22
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25762..26673)
DNA (912bp) protein (304aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
Cysteine synthase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NRQ1_9BACT
cysteine synthase
berkeley_reactor_200306_planktonic_scaffold_101710_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26687..27520)
DNA (834bp) protein (278aa)
Serine O-acetyltransferase {ECO:0000313|EMBL:AEW03199.1}; EC=2.3.1.30 {ECO:0000313|EMBL:AEW03199.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364F254
Serine O-acetyltransferase
berkeley_reactor_200306_planktonic_scaffold_101710_24
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27532..28785)
DNA (1254bp) protein (418aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055979};; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
Sulfate adenylyltransferase subunit 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQF1_NIAKG
sulfate adenylyltransferase subunit 1
berkeley_reactor_200306_planktonic_scaffold_101710_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28819..29727)
DNA (909bp) protein (303aa)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
sulfate adenylyltransferase subunit 2 n=1 Tax=Segetibacter koreensis RepID=UPI0003828E99
sulfate adenylyltransferase, small subunit
berkeley_reactor_200306_planktonic_scaffold_101710_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29757..30479)
DNA (723bp) protein (241aa)
Adenylylsulfate reductase, thioredoxin dependent {ECO:0000313|EMBL:AEW03196.1}; EC=1.8.4.8 {ECO:0000313|EMBL:AEW03196.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Adenylylsulfate reductase, thioredoxin dependent n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQE9_NIAKG
adenylylsulfate reductase
berkeley_reactor_200306_planktonic_scaffold_101710_27
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32018..33259)
DNA (1242bp) protein (414aa)
Sodium/hydrogen exchanger n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE22_CHIPD
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ACU61522.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
berkeley_reactor_200306_planktonic_scaffold_101710_28
unknown

Not on your lists

33393..33818
DNA (426bp) protein (142aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_101710_29
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33932..34294)
DNA (363bp) protein (121aa)
Putative transcriptional regulator n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUX4_SOLCM
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFD07674.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
berkeley_reactor_200306_planktonic_scaffold_101710_30
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34373..35251
DNA (879bp) protein (293aa)
NmrA family protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FCU7_FLAJ1
Contig_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22429.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
NmrA family protein
Displaying items 1-30 of 184 in total

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