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berkeley_reactor_200306_planktonic_scaffold_104042_25

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(30870..31961)

Top 3 Functional Annotations

Value Algorithm Source
Polymorphic outer membrane protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZM6_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 29.2
  • Coverage: 346.0
  • Bit_score: 106
  • Evalue 4.60e-20
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 29.0
  • Coverage: 276.0
  • Bit_score: 111
  • Evalue 4.00e-22
Uncharacterized protein {ECO:0000313|EMBL:AHJ96876.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.0
  • Coverage: 276.0
  • Bit_score: 111
  • Evalue 2.00e-21

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Taxonomy

Hymenobacter swuensis → Hymenobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1092
ATGAAAGCATTATGCGCACTCCTGCTTCTCTGCCTGTTGCCTTTTTCGAAAACCAGTGCACAGGAATTTGTCCTTCCTCCCTTCACAACCGATGTACCCTGTTACGATGGCAGCGCCTATACCCTGAATGTACGCCTCGTGATTACCGGTATCCGTGTCGTTACGGTATATTCCGACAACGGCAGCAGCGGTTCTTTTTCCTTCGAGCTGTTATTTGAGTATATCAATAATTTTACCGGCACCGTAGGTAACGGCGCCGCCTCCTTTTATACCTACGAGGTTACCTTTCATTCAGACAATCCCAACCTGGCTTCGTCCCAGTTTAGCAATAACCTGCAGCTGCCGCTCGTGTCGGATACCGGCGACAATGTTTCCCTGCACAACAACAACACGTATAATGGTTCGGCTTCCGCGATGGGACTTACGGCCAATACCACTTATAACAGCCAGTCGGTCATTAACCTCTTCGGCTTCGACAGCGTTCATGTAACGATCAGCGCGCCATGTCTTACCGTTGCAGGCGGCGCCGTACCGGTAACACCGCTCCCGGTTACCTTAAGCACCTTCAGTGTCAACCAGGATGGCGATGCCTTAGTGCTGAACTGGGCTACGCAACAGGAACGCAACAATAAAGGCTTCCAGGTTCAGAAAAGCCGCGACGGCAAAACCTGGAGCAACCTATTGTGGATTGGCTCCCAGGCTCCCGATGGTAACAGTAATGAAGATCTGCGCTATACCACCAGGGACCTCGCGCCTTTTCCCGGCGACAATATTTACCGCCTGTTGCAAACCGACCGCGACGGACGTACTGAAATCAGCAGAACAGTCCGTTGCAATTTTACCAACGGCGACAACTATACATCCGGTTTAATGGCCTATCCCGTACCGGCCAACGACTTGATCAGGGTACGGTACTCGGATCCTGCGCTGATACCCGACCAGGTAAACCTGTTCGACATGAACGGCAAAAGGGTACTCAGTTATAAACCTACCGGAACCGAAACCACCGTCGATCTGTCGCAATTCCCCAACGGCAGCTACTGGCTGCAATCCGGCGCACAGCACCTCAGGATCGCCATTGTGCATTATTGA
PROTEIN sequence
Length: 364
MKALCALLLLCLLPFSKTSAQEFVLPPFTTDVPCYDGSAYTLNVRLVITGIRVVTVYSDNGSSGSFSFELLFEYINNFTGTVGNGAASFYTYEVTFHSDNPNLASSQFSNNLQLPLVSDTGDNVSLHNNNTYNGSASAMGLTANTTYNSQSVINLFGFDSVHVTISAPCLTVAGGAVPVTPLPVTLSTFSVNQDGDALVLNWATQQERNNKGFQVQKSRDGKTWSNLLWIGSQAPDGNSNEDLRYTTRDLAPFPGDNIYRLLQTDRDGRTEISRTVRCNFTNGDNYTSGLMAYPVPANDLIRVRYSDPALIPDQVNLFDMNGKRVLSYKPTGTETTVDLSQFPNGSYWLQSGAQHLRIAIVHY*