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berkeley_reactor_200306_planktonic_scaffold_123701_1

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(1..3048)

Top 3 Functional Annotations

Value Algorithm Source
YD repeat protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF98_CHIPD">RepID=C7PF98_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 499.0
  • Bit_score: 214
  • Evalue 2.50e-52
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 499.0
  • Bit_score: 214
  • Evalue 7.20e-53
YD repeat protein {ECO:0000313|EMBL:ACU61603.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 499.0
  • Bit_score: 214
  • Evalue 3.60e-52

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3048
ATGAAAAACAGATTAGCGGCGCTATTTCTGGTGCCTATTATGATGTCTCATTTCAAATCCGGGGGGCAATCATTTGCCAATTATATCAAAGCCCTGAACAGCTACGTAGCCGTTGCTCCTGAATCCAGCCAGATTATGAGGGCGATCGATTTCCCTGTTAATCTCTTTACCGGCACCGCTAACATTAACCTGCCGATTGCTACCGTAACGGGTATGGATATTTCGGTACCTGTAGCGCTCAATTATTCAGGGGCTGGCGGCATCCGGGTCGATGAGCTGGCTGGTGAAGCCGGGCTGGGTTGGGCGCTGTCGTTGGGTGGCGAGATCACACGCGAAATCCGGGGAACAGCCGACGAAGGCACATCTACCTCCGCCGGGTTGTTCAATAATCCCCACACCATTCAATGGTACATCAATACCAAAAGGGCTTCGCCTTCAGGCACTATTGATGAAGAAGACCGGGCCTCAAGAGGCGAATTTGACCTGGAACCCGATATCTACTATTTTAAATTCGGCGCCAAGTCTGGTAAGTTCATCTATAACGATCAGCTGCAAAAATTTGAATGTATAGACCAGGAACCTTTAAAGATCGAAAGGATAACCAACGGGTTTTCGATTACCGACGACGACGGTACCCGTTATGTATTTAACAGTATTATCCGCACAGCCACAGCACCGCGTTGTACTAGTGTATCACCCAGTACTTTGGGGCAGGATGTAATTACGAGCTGGCGGATGACCCGGATCGTTAATGCGCAACAGACCGATTCGATCAGGTTTGAATATACCAGTGGTATGTACGAGTTTCGTTCCGCAGGTTCCAGCACCAAATACCAACTGGTAGATGGTCCAGGAGCGCTTCAAACGCGTTTCGACCTGGAATGTTATAATTTGAACAGAATCAGTGGTACCATCCAATTGGATCGTATCTATTCCTCCACTGATTCGCTGGTACTGGAACGGGCAGCGACAGGCCGGGAAGATTTACCGGGTGCTAAAGCTGTGGCGAGGATCCGTACGTATAGCCGTGGTGGTGGTGGTCAGAAGCATGTCTTTACTTTTGACTACGACTACTTTCCCCGGAACCTTGTCGTAGGCGCTCCTTCCGCTGATCTTGCCGCACAAAAAAAATCACTCAGGCTTTTGTCGTTAACGGATCACGGGAATTGGGAGCCGAGTGCGAATCCCCTGAAATGGACCTTTACTTACCGGCCTGAAGATCTTCCAGCCCGCCTGTCGTATTCCCAGGATTTTTGGGGCCTCAACAATAGTAATACCCTCAACACGCTTGTGCCCGAGCAGTTACTGATCTCTCCCTATGGGTCTAATTACCTTTCGGGGGCTAACAGGACACCCAGTCCAGTTTACATGCAGTCGGGTTTACTACAAAGCATTACACATCCTACCGGTGGTAAAACAACGTTTACTTATGAACCTAATACCACCTCTACAGCAGTACCTTATGTTTCCTCTCCGTCTACACGTACCGTACAACATTTAATCAGTGTATTCAAAGGAGAAAATGAGCCCTTTATTGCGGATGAGAATACCTACGATGTTTCTTTCAACATCTCCCAGCCAACCCATCCAATCGTTAATCTCGACCATCCGAACGGTGGTGTAATCGCTGATATTACCGTATTCCCGGCTATTGGTCCGGCAGGTTCTACATCGACGAGTATTGACATGACCAAGCCGTACTTTTTGCTGGAAGGCCCCTCGGGCAGGTCGCTGCAAAACGACCAATATAAGGTACACCTGGATAACGGTACCTATACCATGAAACTCAGGAAAACATCCGCGATGAATAATAGCGCTATTCTCGGGTTGATACGCGTACTCTCTTTCTCCGTAACCTATAAACTTATGGACTCGACATTTACATCTGTGCCCAATTACAACTGTGGGGGGGTACGCATTAAATCTATAGCAGAAACGGACCCTTATTCCAATACTACGATCGTTAAGGATTATATTTACCAAGACCCTGCCACGGGGGCTTCATGGGGCGAGATCATCGGGCCGTCCAATAATGTTTATTATGATTATGCGCATAGGATTGATAACAGTTTCCCCGGTGGGACTTTAGATGTCTTTAGTCAGTACCTGGTCCGGACGGGTAATTGCGTGATACCGGGTAACAACCCAACACAAACACCGGTTATTTATTCCAAGGTGATTGAAAGGACGAGCAATGGTGGACAGGTTCATAAAACGGAACATTATTTCAATACGCGTAAACCATTTTTCCCGAACACCTATCCATATATTCCTCCGATAGATAAGGAAGCCCTACGTGGCAAACCTTTGAAAAGCATAGTCTACCAACAGTCTGCCCCGGGTGTGTTTCTGCCTTCCCGGATGACGGCGTATAGCTATGATGAAGAACCTAATGGCCTAATTAGTGGTACGACCTTTGAACATGAAATTCCGGCTATAAGGTGCTTGCCTGCCGGCTATTCGGAGACGAGCCCCAATGGTGTTCCAGCGATTTCTTCCATCTACAGTACGCTTATTCACCGGGTCTATACCGCAGCCGATTCGGCAGTTGAATATGATGTAGCCGGTATGCCGGCTTTGTCGCAGTGGAATGCCTATGTTTATGGCGATGCCAACCTGAAGCCGGTTAGTGTTACCCGGAAGAACAGTAAAGGAGATCTTAAGATTGAAAAGTATGGTTATGCAGCCGATGCAACCGACCCGGATTTTCAGTTATCTACACCGCTGGCCGCAATGCTTTCGGTGAGCAACCGGATCAGCATGCCATTCCGTTATAAAGCATTTGAGAACGGGAATTTATTAGAGCGGAGTTATAAATACGCGCATTTTTCCGGCAACCAGCTCCTGGTCGATAGCATAAGCCAGGCGATATACAACAACGCCCTGGAGACCGAAGCAAAGATCCCTGACTATGATACCTACGGTAATCCATTGACCGTAGAAGGCCGTGGTGGCCGTTTCCGTAAATACCTCTGGCGTAAGGAACGTAACCTGCCGCTGGCCACCTGTACCATGCCCAGGCGGGGACAGTTCGTTTTTACCTCCTTC
PROTEIN sequence
Length: 1016
MKNRLAALFLVPIMMSHFKSGGQSFANYIKALNSYVAVAPESSQIMRAIDFPVNLFTGTANINLPIATVTGMDISVPVALNYSGAGGIRVDELAGEAGLGWALSLGGEITREIRGTADEGTSTSAGLFNNPHTIQWYINTKRASPSGTIDEEDRASRGEFDLEPDIYYFKFGAKSGKFIYNDQLQKFECIDQEPLKIERITNGFSITDDDGTRYVFNSIIRTATAPRCTSVSPSTLGQDVITSWRMTRIVNAQQTDSIRFEYTSGMYEFRSAGSSTKYQLVDGPGALQTRFDLECYNLNRISGTIQLDRIYSSTDSLVLERAATGREDLPGAKAVARIRTYSRGGGGQKHVFTFDYDYFPRNLVVGAPSADLAAQKKSLRLLSLTDHGNWEPSANPLKWTFTYRPEDLPARLSYSQDFWGLNNSNTLNTLVPEQLLISPYGSNYLSGANRTPSPVYMQSGLLQSITHPTGGKTTFTYEPNTTSTAVPYVSSPSTRTVQHLISVFKGENEPFIADENTYDVSFNISQPTHPIVNLDHPNGGVIADITVFPAIGPAGSTSTSIDMTKPYFLLEGPSGRSLQNDQYKVHLDNGTYTMKLRKTSAMNNSAILGLIRVLSFSVTYKLMDSTFTSVPNYNCGGVRIKSIAETDPYSNTTIVKDYIYQDPATGASWGEIIGPSNNVYYDYAHRIDNSFPGGTLDVFSQYLVRTGNCVIPGNNPTQTPVIYSKVIERTSNGGQVHKTEHYFNTRKPFFPNTYPYIPPIDKEALRGKPLKSIVYQQSAPGVFLPSRMTAYSYDEEPNGLISGTTFEHEIPAIRCLPAGYSETSPNGVPAISSIYSTLIHRVYTAADSAVEYDVAGMPALSQWNAYVYGDANLKPVSVTRKNSKGDLKIEKYGYAADATDPDFQLSTPLAAMLSVSNRISMPFRYKAFENGNLLERSYKYAHFSGNQLLVDSISQAIYNNALETEAKIPDYDTYGNPLTVEGRGGRFRKYLWRKERNLPLATCTMPRRGQFVFTSF