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berkeley_reactor_200306_planktonic_scaffold_123701_27

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(31556..31747)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036BAB1B similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 63.0
  • Bit_score: 102
  • Evalue 1.50e-19
cold-shock protein similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 63.0
  • Bit_score: 99
  • Evalue 2.70e-19
Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:EWH15097.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojensis KL-A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 63.0
  • Bit_score: 99
  • Evalue 1.40e-18

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Taxonomy

Cellulophaga geojensis → Cellulophaga → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 192
ATGCAAGAAGGAACAGTAAAATTTTTCAATGAAACCAAGGGATTTGGCTTCATTACTCCTGTAAACGGTGGTTCAGACGTATTCGTTCATATCTCCGATCTTAAAGGTGAGATTCGCGAAGGCGACAAAGTTACATTTGATGTACAGGATGGCCGCAAAGGACCAAACGCAGTTAATGTAACCGTGCTTTAA
PROTEIN sequence
Length: 64
MQEGTVKFFNETKGFGFITPVNGGSDVFVHISDLKGEIREGDKVTFDVQDGRKGPNAVNVTVL*