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berkeley_reactor_200306_planktonic_scaffold_131577_1

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(1..1602)

Top 3 Functional Annotations

Value Algorithm Source
PDK repeat-containing protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KPG3_SOLCM similarity UNIREF
DB: UNIREF100
  • Identity: 27.8
  • Coverage: 586.0
  • Bit_score: 172
  • Evalue 7.60e-40
Uncharacterized protein {ECO:0000313|EMBL:KIA93374.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.2
  • Coverage: 539.0
  • Bit_score: 286
  • Evalue 5.10e-74
PDK repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 27.8
  • Coverage: 586.0
  • Bit_score: 172
  • Evalue 2.20e-40

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Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1602
ATGAAAAAAATTATATGCTTATTCCTGCTTTCTGTAGTAACAAGTACTTCCTTTGCCCAGGTGTGCAGCGGTATATGGGGCGCCACCATCGTCAACCAGACCTTCGGACAGGGTAATGCTACCGACAACTGGTACGGTCCGCTGGCCACCTTTGCCCCGGGGGCCACTACCGCCACCACCTTTGTAGGCGCCGCAGGACCCGCAGGAGGCACCCTGAGCGACGGCGCTTCGGGACTTACAAAAACACCTTCGGTAGCGGGTCAGGGCGCTAACTTCATCAACAAAAGCGACCATACCGGCAACCCCAACGGGCTTATGTTCCTCATTAATGCGCCTTCTACCGCGGCCACGATATTTTTCGAATACACGATGGACAATCTTTGTCCCAATACCACGCTGCGCCTCTCGGCCTGGGTACTGAACGTCAACAGCGGCATCGTACCTACCTCTACCTGCGCCACCAATTACCAGTATCCCAACCTCACGCTTCGGGTCATAAACCCGGTAACCAATGCCATACTGGGTACCACGCCTACCGGCAATGTGCCGCTGGACAGCGCCTGGCACCAGTATTCGATCATCTTCAACAACGGAACCAATACCTCGGTAAAACTGCAACTGATCAACAACTCGGTAGGCTCGGGTTGCGGTAATGACCTGGCACTCGACGATATAACCGTGCAACCCTGCGTACCCGTTTCGCATGTATTACCCAAAATAGATACCCTCATTTGCCAAAATGCTTCGCTTACCTTTAACGCCCAGGTAATTGCCAGTCCGTACAACCCCGCCGAATTCCAATGGCAATACAGTACCGATGCGGGTGTTACCTGGCAGAACCAGGGCGTGGCCTCCAACAGTACGGCTTATGTATTCAATGCCTCTACCGCAGCGCCCGGCACCTATTGGATACGCTACAAAACAGGACCGCAAGGCACTACCGGCAATGATAACTGTATCGCCACCAGCGATACTACCAAAGTAACCGTAAGCGCGCCACCCGTATTGCCCGTGCTGACCTATACCAGCAAATACTGCACCGGCACGGCATTCGAAGGCTTTACCGTAGTGTCGGGTACCAATCTTAAATGGTATACCAATCCATCGGGAGGCGTGGGCGCCACGGCAACCCCGGTTGTGAACACATCGGTACCGGGCGTGCATACCTGGTATGTAAGCCAGACTACGGTACAGGGTTGCGAAAGCGGCCGGCTCCCCGTTACCGTTACGGTAGAGCAAATGCCGCAATCGTCGTTTACCCCTGTGTTTGGCCTGGCTTGCTCCCAGGATACCGTTCACTTCCAGAATACCTCTACCCATGGCAACACTTTCTACTGGGACTTTGGCGACGGCATTACCGATACGGCCAAAAACCCGGTACACATTTACCAGGACCAGGGCAGCTATAGCGTCACGCTGGCTGCTTACAATAGCTATTGTGCCGATACCCTTTTTGAAACGGTAACCATTACCCATCCGCTGACCGCGCTCTTTACCACCAGCGCCGATACCATTTGCGAAGGTGGCAGTATAACCTTTACCAATACCTCCACCGCTACTACCGTAAACGGCATAGCGCCCACCTACCATTGGAACTTTGGC
PROTEIN sequence
Length: 534
MKKIICLFLLSVVTSTSFAQVCSGIWGATIVNQTFGQGNATDNWYGPLATFAPGATTATTFVGAAGPAGGTLSDGASGLTKTPSVAGQGANFINKSDHTGNPNGLMFLINAPSTAATIFFEYTMDNLCPNTTLRLSAWVLNVNSGIVPTSTCATNYQYPNLTLRVINPVTNAILGTTPTGNVPLDSAWHQYSIIFNNGTNTSVKLQLINNSVGSGCGNDLALDDITVQPCVPVSHVLPKIDTLICQNASLTFNAQVIASPYNPAEFQWQYSTDAGVTWQNQGVASNSTAYVFNASTAAPGTYWIRYKTGPQGTTGNDNCIATSDTTKVTVSAPPVLPVLTYTSKYCTGTAFEGFTVVSGTNLKWYTNPSGGVGATATPVVNTSVPGVHTWYVSQTTVQGCESGRLPVTVTVEQMPQSSFTPVFGLACSQDTVHFQNTSTHGNTFYWDFGDGITDTAKNPVHIYQDQGSYSVTLAAYNSYCADTLFETVTITHPLTALFTTSADTICEGGSITFTNTSTATTVNGIAPTYHWNFG