ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_131577_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(6956..7291)

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c5 n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CKX7_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 106.0
  • Bit_score: 78
  • Evalue 4.10e-12
Uncharacterized protein {ECO:0000313|EMBL:KGE13828.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 99.0
  • Bit_score: 133
  • Evalue 1.10e-28
dorC; DMSO/TMAO pentaheme cytochrome c subunit similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 106.0
  • Bit_score: 77
  • Evalue 2.60e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobacterium sp. ACCC 05744 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 336
ATGAAGAAGATAGCCGCGATTATCCTGTACGGCGCCTTTGCCACCCTGATGGTGCACTGTTCGCCTAAAGCCAGCAAAGCAATCGCTGAGCTGCCCGTAGAATCCAAAGAACAGATTGTTGCCCAATACAGCCCGCAGCAACTCGAATCGGGCAAAACCATTTTCATGAGCAGCTGTAACAAATGCCATAAATTAAAAGAACCGGGCAGCCGTACACCCGAACAGTGGAACAAAGTGCTGAAACGCATGATCCCGAAAGCCAAGCTGAGCGACGAGGACGGAAAGCTGGTACGGGCGTATCTTATAGCCAATTCCAAAACAGCCATCAACAAATAA
PROTEIN sequence
Length: 112
MKKIAAIILYGAFATLMVHCSPKASKAIAELPVESKEQIVAQYSPQQLESGKTIFMSSCNKCHKLKEPGSRTPEQWNKVLKRMIPKAKLSDEDGKLVRAYLIANSKTAINK*