ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_131577_11

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(8605..10086)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A core-O-antigen ligase-like enyme n=1 Tax=Saprospira grandis DSM 2844 RepID=J1I8J7_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 32.8
  • Coverage: 482.0
  • Bit_score: 297
  • Evalue 1.90e-77
Lipid A core-O-antigen ligase-like enyme {ECO:0000313|EMBL:EJF54798.1}; Flags: Precursor;; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.8
  • Coverage: 482.0
  • Bit_score: 297
  • Evalue 2.70e-77
O-antigen polymerase similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 482.0
  • Bit_score: 296
  • Evalue 9.20e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Saprospira grandis → Saprospira → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1482
ATGATAGCCGGACTAAAATATACACCAACCCTCGAAAAGTGGGTTACCTGGGGAGGCGGGGCATTGTTCCTGGCCTGTATCAGCCTGTTTGCCTATACCTCAAATTACTACCTGCTGGCCATACCCTTTGCGGTACCGGTACTGGCCCTGGCAATTTTTAACTGGAAAGCTTTTTACTGGCTCTTCCTGTTGTGTATCCCGCTTTCGTCGCCGGTGTTCTTTTTACATGATTCCATCTCTACGACTTTCCCCGACGAACAGTTTATGTGGATGTTCTTTATCATGTTTATCGTACTGGTTGCCGCCAACTATAAGATACTGCCCGAATGGTTTCTGCGCCACCCGCTCACCCTGGTGCTCATCCTCCAGTTTACCTGGCTGCTGGTTGCCGTAGGCTTCTCCCAGGATTTTGTATTGTCGTTTAAATACATGCTGGCCAAGTCCTGGTTTATCATCAGCTATTTCATCTTCCCGGTGCTTATTTTCAGGGAGAAGAAAGATTTTGTTACGGCCTTCAAACTGTTTGTCATTCCCGTAATCCTGCATGCCCTGTTTGCCTTTACCTGGCATTATTTCCTGCATTTCGGGTTCTGGGATTCGAATAAAGTGGTTCGCCCCTTCTATCGCAACCACGTCGATTACTCTACGGTATTGTCCATGGTATTCCCGCTGTTGCTGGTTGCCTACCAATTATGCAAAGGCAATAAACGCCTTCGTATCCTGCTGCTTTGCCTGATCATCTTCTTTATCCCGGCTATCTATGTAGCTGCGGCCAGGGCTGCTATGATCGGGATTATGTTCAGCCTGGTTATCGCTTTCGCGGTCCGCAAAAAACTGGTGCAATGGGTGCTGCCGCTGTTTTTTGTTTTTATCACCTCGATGGTAGCCTTTATGGTAAAGGACGATAAATACCTCGACTACCGGCCCAATTATAAGTATACCTTTACCCAGGTCTCTTTTGCCGATCTGATAACAGCGACCTTCAGGGGTACCGATATGTCGTCGCGGGAACGCTTTTACCGCTGGATAGCCTCCGCCCGTATGAGTATGGATCACCCGCTGGTAGGCGTGGGGCCCAACAACTTCTATACTCATTACAAAGGGCATGCCGTAACCCTGTTCAAAACCTATGTACAGCGCAACGAAGAAAAATCGACCACGCACAACTATTTTATATTTATGCTGGTGGAACAAGGCTGGCCGGCTATGATCCTGTACGGCATCCTGATGATGGCCATCTTTAGCAACGGTCAGCGCATTTACCACCAGAGCCGGGATCCCTTCTTCAAAAAAGTAACCATGGGCCTGGTGATGCTGGCGGCCGTGGGTTTTGTCAACAACTTTTTCTCCGAGCTGATCGAGACCGATAAAGTAGGCGCTTTGTTTTTTATTCCCATAGCCCTGCTGATCGTGATTGATCATAAAAATAAAAAAGCCCTGAAGACAGCGGAACCCGCTTCTGACAAGGATTTATCCGCATAA
PROTEIN sequence
Length: 494
MIAGLKYTPTLEKWVTWGGGALFLACISLFAYTSNYYLLAIPFAVPVLALAIFNWKAFYWLFLLCIPLSSPVFFLHDSISTTFPDEQFMWMFFIMFIVLVAANYKILPEWFLRHPLTLVLILQFTWLLVAVGFSQDFVLSFKYMLAKSWFIISYFIFPVLIFREKKDFVTAFKLFVIPVILHALFAFTWHYFLHFGFWDSNKVVRPFYRNHVDYSTVLSMVFPLLLVAYQLCKGNKRLRILLLCLIIFFIPAIYVAAARAAMIGIMFSLVIAFAVRKKLVQWVLPLFFVFITSMVAFMVKDDKYLDYRPNYKYTFTQVSFADLITATFRGTDMSSRERFYRWIASARMSMDHPLVGVGPNNFYTHYKGHAVTLFKTYVQRNEEKSTTHNYFIFMLVEQGWPAMILYGILMMAIFSNGQRIYHQSRDPFFKKVTMGLVMLAAVGFVNNFFSELIETDKVGALFFIPIALLIVIDHKNKKALKTAEPASDKDLSA*