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berkeley_reactor_200306_planktonic_scaffold_164454_7

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 5423..6652

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SE75_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 416.0
  • Bit_score: 258
  • Evalue 1.10e-65
Contig83, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75782.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 307.0
  • Bit_score: 272
  • Evalue 5.80e-70
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 296.0
  • Bit_score: 238
  • Evalue 2.50e-60

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Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1230
ATGACACGGAAACTTTTTAGCACGGCCCTGCTTTGGCTGATATGCAGTATCCTCGTTTTCTTTTGCTTCCTGATTGTAGCTTCGGCACAGGAGCTCAAGCCGCGCCCGGCACATGTAGGTATCATCTACCCCTTAAGTACCAATGGTACCGATGCCCCGGAATGTAGCAACCGTTTTTCCTTACATCTTATCTCCGGTGTTTCGCGTAATGAAACTGCTTTTTGTTTGTCCGGCATTTCGGGTGTGGTGCGGCAAAATGCACAGGGGCTCATGCTTTCGGGCATTACCAATATCGTGGGCAACCAGGCCCGTGGCGCGCAGGTAGCCGGTATCCTTAACCTGGCGCCTAAAACATCGGAAGGAGCGGCCATCGCCGGTATTGCCAATATCTCCGGCGAGATGCGCGGAGCGCAGGTTGCCGGTTTTGCCAATATCGTACATCGTGGCGAGGGCGCACAGGTAGCGGGTTTCATGAACAAGGCGCAAACAACCGATGCCCAGGTAGCCGGCTTTCTCAACCTTGCTCAGAGTACCGATGCCGTACAGGTAGCCGGTTTTGCAAATGTATCGGCCAAAGGCTCCGGCACGCAGGTAGCGGGTTTCGCCAACCTGTCGGGTAAGGCGCAAGGGGTACAGCTGGCGGGCTTTGGCAACCTGTCGCGCGGCGATGCCCAATCGCAGGTGGCTGGTTTTATCAATATTGCCCGCAAGGTAAAAGGGGTACAGGTAGCCGGTTTTATCAATATAGCCGAAGAGAGCGACTACCCCATCGGGCTCATTAATATTATCAAAAACGGGGAAAAACAGATCGGCGCCAGTATCGACGAATCGGGCGTAAGTATGCTGAGTTTCCGGTCGGGGGGCCGTTACCTGTACGGCATACTCGGCGTGGGCTACAATTTTAAAGAAGACAATGCCCGTTACGCGCTTGAAGGTGGTATCGGGTTCCATATTCCCATCGTACGTTACTTCAGGGCTAATGTGGAAATGACGGGCGGCGTGCTTTCCGACCTGCAGCATAATGTATACTATAAATCAGGCTTCCGCGTACTCGCCGCGTATAAGGTGGCCAACCGCATCGAGTTTTTCGCCGGCCCTTCTGTCAACAACCTGAGTTACGAAAGAGACCAGGACGATATCCGGGATCAATACCTCTGGCAGCATAAAGGACGCCACAATATCAACGGAATATATATCGGCGGAATAGCGGGTATACAAGTGAATCTTTAA
PROTEIN sequence
Length: 410
MTRKLFSTALLWLICSILVFFCFLIVASAQELKPRPAHVGIIYPLSTNGTDAPECSNRFSLHLISGVSRNETAFCLSGISGVVRQNAQGLMLSGITNIVGNQARGAQVAGILNLAPKTSEGAAIAGIANISGEMRGAQVAGFANIVHRGEGAQVAGFMNKAQTTDAQVAGFLNLAQSTDAVQVAGFANVSAKGSGTQVAGFANLSGKAQGVQLAGFGNLSRGDAQSQVAGFINIARKVKGVQVAGFINIAEESDYPIGLINIIKNGEKQIGASIDESGVSMLSFRSGGRYLYGILGVGYNFKEDNARYALEGGIGFHIPIVRYFRANVEMTGGVLSDLQHNVYYKSGFRVLAAYKVANRIEFFAGPSVNNLSYERDQDDIRDQYLWQHKGRHNINGIYIGGIAGIQVNL*