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berkeley_reactor_200306_planktonic_scaffold_176984_3

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(1680..2648)

Top 3 Functional Annotations

Value Algorithm Source
Probable transcriptional regulator, AraC family n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GZT9_FLAPJ similarity UNIREF
DB: UNIREF100
  • Identity: 39.1
  • Coverage: 294.0
  • Bit_score: 216
  • Evalue 2.10e-53
putative AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 315.0
  • Bit_score: 308
  • Evalue 1.20e-81
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:BAP31942.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 315.0
  • Bit_score: 308
  • Evalue 5.80e-81

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Taxonomy

Chryseobacterium sp. StRB126 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 969
ATGGGTAAGAAAGCAAAAGCCGTTGTCGTTACAGATTTTCTGCAGCATATTAAAAAGCTCGGGGGGCGCACAAACAAGGCGGGCCGGCTCAACCTGCCGGGGAGTCTGGGTACAGGATACCTGCAAAGAATACAGCTTTCGCCAGACCTGGGTATCATGCTCCAGCAGTTTGTATTACACGAAAGAATGATCGTAAAACGGGCAGAAAAACCAGGTAAGGAGGATATGCTGATCTTCAGTTTCCGGAATGTGTTGCCGGATAAGCAGGGTATGGCCGGGAAGCCGGATGCCAGGCTACTGTCATCGGTACAGGTTTCTACTTTCGATGTAGGGGTAGACCTGGATATACCTGCGCATACGGCGATCAATAACCTGGTCATTGGTATCCACAGCGATTTGCTGAACGAGTTGATGGCGGGTGCCGCTAATCATAAACTGGTAACGCAACTGACGAACGGGCAGCAGCCTTATCTCTGCGAAGCAATTATATCGCCGCAGATACAGGCCGTTGCAGCAGCGGTTTTCCAGGCTGATGCTGCCGGGACGCTGGCTCATTATTTTTACCGGGTTAAAGCCGGGGAGTTGATTTATTGGTTCCTGGTAGAACTGTTGAAACGGGAGGCCGTACCCGCTTACCCGTTGAATTATGAAGACATTAACCGGGTATACGCCATCCGTAATGCGATCATTAATAACCTGGATGTACCGCCTCGGCTGGCGGTATTGGCGAAAGGGGCGAATATGAGTGTGACGAAGATGGGCCGGCTTTTCCGGCAAATCTTCGGTGATAGTATTTATAATTATTATCAAAAAATAAGGATGCAACATGCTGCGGCCTTATTACGCGAAAAAGGGCTTTCGGTATCGGAAGTAGGCTATGGGCTTGGCTTTTCGAACCTGAGTCACTTTGCGAGACTGTTTGAAAAACTGATCGGGACAAAACCGAAACAGTACAGCAAAGGAGGGTAG
PROTEIN sequence
Length: 323
MGKKAKAVVVTDFLQHIKKLGGRTNKAGRLNLPGSLGTGYLQRIQLSPDLGIMLQQFVLHERMIVKRAEKPGKEDMLIFSFRNVLPDKQGMAGKPDARLLSSVQVSTFDVGVDLDIPAHTAINNLVIGIHSDLLNELMAGAANHKLVTQLTNGQQPYLCEAIISPQIQAVAAAVFQADAAGTLAHYFYRVKAGELIYWFLVELLKREAVPAYPLNYEDINRVYAIRNAIINNLDVPPRLAVLAKGANMSVTKMGRLFRQIFGDSIYNYYQKIRMQHAAALLREKGLSVSEVGYGLGFSNLSHFARLFEKLIGTKPKQYSKGG*