ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_176984_12

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(11108..11860)

Top 3 Functional Annotations

Value Algorithm Source
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y920_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 246.0
  • Bit_score: 386
  • Evalue 2.10e-104
Fumarate reductase {ECO:0000313|EMBL:KIA96145.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 248.0
  • Bit_score: 400
  • Evalue 1.10e-108
succinate dehydrogenase/fumarate reductase iron-sulfur subunit similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 246.0
  • Bit_score: 382
  • Evalue 6.40e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 753
ATGAAGATACATCTGAAAATATGGAGACAGGATGAGCGGGATGGTCCCGGTAAGATGGTGGACTATAACCTGGATGATGTAACGGAAGATATGTCGTTCCTCGAAATGCTGGATGCCCTGAATGGCGTACTGATCGAAAAGGGAGAAAGGGTGATAGAATTTGATCATGACTGCCGGGAAGGGATCTGCGGGCAATGTGGCATAATGATCAACGGAAGGGCGCATGGCCCTTTGCCGCATGTAACCACCTGCCAGTTGCATATGCGTTCCTTCCGGGACGGCGATGTTATTTATATCGAACCGTTCCGGGCGGCAGCTTTCCCGGTGTTGCGCGATCTTAAAATAGATCGTTCCGCCTTCGACCGGATCATACAGGCCGGTGGTTATATTTCCGCAAGCACCGGTTCGGCGCCCGAAGCCAACAGTATTCCTATCGGCCACGAAACGGCGGAAGCCGCTTTTGATGCGGCAGCCTGCATCGGTTGCGGCGCTTGTGTGGCTACCTGTAAAAATTCGAGTGCCGCCTTATTCGTCTCCGCCAAAGTGGTGCACCTGGCTTTACTGCCCCAGGGCAAACTGGAGGAAGCGCAACGGGTAAATGCGATGATCGCCCGGATGAACACCGAACAGTTCGGGCATTGTTCCAATACGGAAGCCTGCGAGGTAGAATGCCCCCAACAAATTTCCGTACTGCATATCGCCCGTATGAACTGGGCTTTTAACCGGTCTAAATTACTGGGCCGGAAACGATAG
PROTEIN sequence
Length: 251
MKIHLKIWRQDERDGPGKMVDYNLDDVTEDMSFLEMLDALNGVLIEKGERVIEFDHDCREGICGQCGIMINGRAHGPLPHVTTCQLHMRSFRDGDVIYIEPFRAAAFPVLRDLKIDRSAFDRIIQAGGYISASTGSAPEANSIPIGHETAEAAFDAAACIGCGACVATCKNSSAALFVSAKVVHLALLPQGKLEEAQRVNAMIARMNTEQFGHCSNTEACEVECPQQISVLHIARMNWAFNRSKLLGRKR*