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berkeley_reactor_200306_planktonic_scaffold_176984_14

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(13823..14482)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y918_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 218.0
  • Bit_score: 295
  • Evalue 2.40e-77
Succinate dehydrogenase {ECO:0000313|EMBL:KIA96147.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 214.0
  • Bit_score: 304
  • Evalue 7.40e-80
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 216.0
  • Bit_score: 271
  • Evalue 1.10e-70

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Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 660
ATGCAATCAACCCAGGTATCGAAGATATGGATGGCATTAACGGGCTTTTTCCTGTGTTTCTTTCTTGTTATTCATTTATTGGGCAACCTGCAGCTCCTGCTGCCGGCAGACCGGGCCAGGGCCGCCTTTAACTGGTATTCTCATCTGCTGTCGGGTAATATCCTGATTAAAATCATTGAGTGGGTCTTATTTATAAGCATTATCGCTCATGTCGTTTATGCACTGAGGCTCACCATCCGGGCGCGTAAAGCAAACGGGACGACCTATGTATACGACAAGCGGAAAGCGGCCAGTACATGGAGCAGCAGGAATATGGGTTTCCTGGGCATCATCATCCTGTTATTCCTGATTATACATCTTAAAGACTTCTGGTATCATTATAAATTCGGCGCCTTGCCCCTCGACGAGCAGGGTTATACGGACCTGTACACGGTGGTGGTGGCGGCTTACGACCAGTTATGGTATGTGTTGCTCTACCTGGCCGGTATGGCGGCCCTGGGCTTTCATTTGTTGCATGGCTTTGCCAGTGCAGCCCGCACCCTGGGTTTGTATCATCCGATGTACAGCCATATCGTACGGGTAACCGGTGTCGTATACACGCTGATCATCACTGCCGGGTTTATGATCATACCTGTTTACATGTACTTCAATAAAGCCTGA
PROTEIN sequence
Length: 220
MQSTQVSKIWMALTGFFLCFFLVIHLLGNLQLLLPADRARAAFNWYSHLLSGNILIKIIEWVLFISIIAHVVYALRLTIRARKANGTTYVYDKRKAASTWSSRNMGFLGIIILLFLIIHLKDFWYHYKFGALPLDEQGYTDLYTVVVAAYDQLWYVLLYLAGMAALGFHLLHGFASAARTLGLYHPMYSHIVRVTGVVYTLIITAGFMIIPVYMYFNKA*