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berkeley_reactor_200306_planktonic_scaffold_262904_16

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(21996..25016)

Top 3 Functional Annotations

Value Algorithm Source
Putative regulator of cell autolysis n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JVC1_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 29.0
  • Coverage: 1010.0
  • Bit_score: 440
  • Evalue 3.70e-120
Putative regulator of cell autolysis {ECO:0000313|EMBL:EJL71825.1}; Flags: Precursor;; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.0
  • Coverage: 1010.0
  • Bit_score: 440
  • Evalue 5.20e-120
signal transduction histidine kinase LytS similarity KEGG
DB: KEGG
  • Identity: 26.8
  • Coverage: 1007.0
  • Bit_score: 258
  • Evalue 7.40e-66

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Taxonomy

Chryseobacterium sp. CF314 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3021
ATGAAACCCGGAGCCCTGACCATGCTTTACCGGGCGCTTTGCGCCTGCTGCCTGCTACTGGGTGCAATACCCCTGCGGGCACAGTTGCCGGGCATGTTACGGTTTGGACGAACGGAAGGTTATAACGCCACGATCGGGTATAACATTCACCAGGATGGCAAAGGTTATATATGGATCGGTTCGGATATAGGAGCCATCCGTTTCGATGGCAAAACCTTTAAGTATTTCGACCAGCGGGACGGGCTTACCGACATCGACATTATGGACTGTATGCCTTACGGCAACGACGAGGTACTTTTAATTCCTTTGCTGAACAACCTGGCCCGCTACAGATCCGGCAAGGTTGTACCACCCGCCGCCGACAGCCCGCTCGCGATGATCAGGAGCACCTTTCGCAACTTTCCTTTTACAGACCTGGCCGACGAAAGCCTCTGGCTCAGCAATGACTCCCGGCCCGACACCTTCTATCATTTTACCCGACAGGGCATAGAACCCGTCGCCGCTAACCTGCCCAAATCGTTTGCTACCCTGAACATCAACAGAGGCATAGCGCTTTTATGGAACGTCAGGAATAACAATACAGGTACACTTTCCCTGTTCAACCTCCGGACCCGGGAACTCGTACCGCTGCAGGAACGTGATGGAAAACAGGTATCCGCCGCATGGCCCCGCAAGACCGTTGTGTCACCGGATGGCAGGTACCTGGTGATTTACCATCCCAAAACAACCGTGATGGAGGTATTTCATATCGGGGAAGATGGTATGGCGAAAAAAGAATACGAGCGCACGATCCATCTCAAAGTTTCTATTGATCACGGCTTATCCCTTGACGCATCCTATAACCTGTGGATTACCCTAACCCAGGGCGGTGTGGTTTACCTCCCCGACGTGCGGCAGCCTGATCCCGGCAAAACACGCTTTACCTTCCTCGAAGACCAGAATATCAATCATGCCATTACCGACCGCGACGGTAATAAATGGATTTCGACGAAAAACAGCAGCCTCTATTTTATCTCTGCCAAACACTTCGAAAATGCCATGATGAGCGCAGCGCTTCCGCTGCTTAAAACCCCGGCACATTTTATTTCCGGCAACGGGAAGGGCCAGCTATACCTGGGTTACCTGGGCAAGGATGTGCTGTCTGTCCTGAACCACAAGCAGGCGCAGCAGATTCCCTTAAAGCGGCCTTTCTGGGAAGGCATACGTTTTATTTTACCACTCGACGATCATCGCCTGCTGGCTATTTACAATGCATTAGTCTATAGAGATACCCATACCGGCAAGATGCAATACCTGCATTTTTCCAGCTCGCTCAAAGATATTTGCCTGTATAAACAAGACACCCTGCTCGGCGCCTTAAACGGAGGCCTGGTAGCCTATAGTCTTAAAGACTTTATACGCGGGGATAAATTACAGGAACGCTTTGTTCTGAAACGACGGACTACAGCAGTGCAGGCATTAAAGGACAAAATACTGGTCGGTACGCCCAACGGCTTGTATACCCTGAGCGGCCCCTCGGCCAGCCCGCAGAGAGTAAGCGATCCGGTGCTGGGGTATTCGAACATCACGGATATAGAACCCTATAAAGATACCGATGCCCTGGTCAGCACCAATGCCCAGGGACTTTTTATCGTTAAAACAGCAACCGGGAAAAGTACATCCCTAAAGGATACATCGGGCCTGACCCGGAATAAAATTCAACGCATCTACCACCAGCAGGACAGCCTTTATTGGTTGGCCACTAATAAAGGAGCGATACAACTCTACATCGACCAGGCAGACCAGGCGCATATCCTGCATAACTATAATTTCTACGACGGCCTGCCCTCCGATAATGTAACGTCCATATATGTGTACCAGGATACGGCATTTATCGCCACCACGGAGGGCCTGGGCATTATTGCCCTCAACGATCCGCGTACGGCACAGATCCATACACCGCAGGCTTATATCAATACCCTGGAAACAAGCGATTCGTTGCTTTACTGCCCGGCGGGCACCATACGCCTACCCTACCACCAGAACAATATAGTACTGTCGTTAAGCGCCATCGCTTACGAGAGCATGGGGAATACCGGTTACTATTACCGGCTTAGCGGCCTGAGCGACCAGTGGATAAAGACCAGCAACCCCGAAATAAGGTTCACGGCCTTACCTCCCGGCAACTATACGTTTTTTGCCTATGTCCGGAATGCAACGGGTATTACAAGCCAGGGCCTGATCCGGCTCGACATCTGTATAGAACCCGCCTTATGGCAAAATATATATTTTAAGATCGGCGTTATACTGGTTATCGGCCTGTTACTTGCCCTGGCGATCCGCAAATGGGCAGGCAACAGGGAGCAGCGAAAATTTGCAGCAATACAACTTAAAAGAAAATGGGCAGAACTGGAGCTGGAAGCGATTAAAGCACAGATCAACCCGCACTTTATCTATAACTGTCTTAATTCGATACAGTATTTCAACTATAAAAAAGAATACGAATATGCACAGGAATACCTCGATCATTTCGCCAGGCTAATCAGGCTTACCATGCAGTATTCCCGGCAAACTTTCATAACGATCCGGGAAGAAACCGATTACCTGGAATTATACCTGAGACTGGAAAAACTAAGGTTCAAACACAAGCTCAACTACGAAATACAAATCGACGACAGGATCGCTACCAACCTCCGGATACCAGCCATGCTGATACAGCCCTACGTGGAAAATGCGTTGAAACACGGTATCGCTAAAAAGCGTAACGCGGGCAGGATCATCGTAAGGTTTCGCCCCGGGGGCCTGGGTAATATCCTCGTTACGGTAGAAGACGACGGACCGGGTTTCGCCGGTAAGAGCCCGGGAGACGGCAGATCATTAGGCCTGCGCATATCCAAGACCCGCGCGGCATCCTATAAACAATTATTTGGCCTGCAGATCGACATTGACCTTTACAATAAACAAGACACCAACCACGGCCAAAGCGGGGCAATTATCCATGTAAACATACCCATAACAGACTATGAAGACAGCTACGTATAA
PROTEIN sequence
Length: 1007
MKPGALTMLYRALCACCLLLGAIPLRAQLPGMLRFGRTEGYNATIGYNIHQDGKGYIWIGSDIGAIRFDGKTFKYFDQRDGLTDIDIMDCMPYGNDEVLLIPLLNNLARYRSGKVVPPAADSPLAMIRSTFRNFPFTDLADESLWLSNDSRPDTFYHFTRQGIEPVAANLPKSFATLNINRGIALLWNVRNNNTGTLSLFNLRTRELVPLQERDGKQVSAAWPRKTVVSPDGRYLVIYHPKTTVMEVFHIGEDGMAKKEYERTIHLKVSIDHGLSLDASYNLWITLTQGGVVYLPDVRQPDPGKTRFTFLEDQNINHAITDRDGNKWISTKNSSLYFISAKHFENAMMSAALPLLKTPAHFISGNGKGQLYLGYLGKDVLSVLNHKQAQQIPLKRPFWEGIRFILPLDDHRLLAIYNALVYRDTHTGKMQYLHFSSSLKDICLYKQDTLLGALNGGLVAYSLKDFIRGDKLQERFVLKRRTTAVQALKDKILVGTPNGLYTLSGPSASPQRVSDPVLGYSNITDIEPYKDTDALVSTNAQGLFIVKTATGKSTSLKDTSGLTRNKIQRIYHQQDSLYWLATNKGAIQLYIDQADQAHILHNYNFYDGLPSDNVTSIYVYQDTAFIATTEGLGIIALNDPRTAQIHTPQAYINTLETSDSLLYCPAGTIRLPYHQNNIVLSLSAIAYESMGNTGYYYRLSGLSDQWIKTSNPEIRFTALPPGNYTFFAYVRNATGITSQGLIRLDICIEPALWQNIYFKIGVILVIGLLLALAIRKWAGNREQRKFAAIQLKRKWAELELEAIKAQINPHFIYNCLNSIQYFNYKKEYEYAQEYLDHFARLIRLTMQYSRQTFITIREETDYLELYLRLEKLRFKHKLNYEIQIDDRIATNLRIPAMLIQPYVENALKHGIAKKRNAGRIIVRFRPGGLGNILVTVEDDGPGFAGKSPGDGRSLGLRISKTRAASYKQLFGLQIDIDLYNKQDTNHGQSGAIIHVNIPITDYEDSYV*