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berkeley_reactor_200306_planktonic_scaffold_202757

Search features with annotation key words

Displaying items 91-120 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_202757_91
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(131785..132813)
DNA (1029bp) protein (343aa)
Putative uncharacterized protein id=3323609 bin=GWF2_Lentisphaerae_50_93 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
oxidoreductase
Tax=GWF2_Lentisphaerae_50_93_curated
berkeley_reactor_200306_planktonic_scaffold_202757_92
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

132980..136399
DNA (3420bp) protein (1140aa)
Putative uncharacterized protein id=3759156 bin=GWF2_Planctomycetes_42_9 species=Opitutaceae bacterium TAV1 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
carbohydrate-binding protein
Tax=CG_Arma_01
berkeley_reactor_200306_planktonic_scaffold_202757_93
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

136471..138552
DNA (2082bp) protein (694aa)
Alpha-galactosidase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AQU6_9BACT
Alpha-galactosidase {ECO:0000313|EMBL:EIP97387.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
family 36 glycoside hydrolase
berkeley_reactor_200306_planktonic_scaffold_202757_94
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

138557..140239
DNA (1683bp) protein (561aa)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B3T4_9BACT
beta-galactosidase
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
berkeley_reactor_200306_planktonic_scaffold_202757_95
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(140273..141028)
DNA (756bp) protein (252aa)
Transcriptional regulator of sugar metabolism n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B090_9BACT
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:EIQ00682.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
DeoR family transcripitonal regulator
berkeley_reactor_200306_planktonic_scaffold_202757_96
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(141085..142107)
DNA (1023bp) protein (341aa)
PfkB domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9A0_9BACT
PfkB domain protein {ECO:0000313|EMBL:EDY17003.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ribokinase-like domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_202757_97
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(142104..142679)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003679A19
ATP synthase delta chain
ATP synthase delta chain {ECO:0000313|EMBL:AIE86422.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
berkeley_reactor_200306_planktonic_scaffold_202757_98
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(142689..143735)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B088_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIQ00680.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
berkeley_reactor_200306_planktonic_scaffold_202757_99
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(143740..144864)
DNA (1125bp) protein (375aa)
Oxidoreductase domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMB0_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF58952.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oxidoreductase domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_202757_100
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(144869..145699)
DNA (831bp) protein (277aa)
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMB4_9BACT
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EEF58956.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
aldolase protein
berkeley_reactor_200306_planktonic_scaffold_202757_101
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(145805..146515)
DNA (711bp) protein (237aa)
araD; ribulose 5-phosphate epimerase (EC:5.1.3.4)
Class II Aldolase and Adducin N-terminal domain, putative n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JF88_9BACT
Class II Aldolase and Adducin N-terminal domain, putative {ECO:0000313|EMBL:EDY84394.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
berkeley_reactor_200306_planktonic_scaffold_202757_102
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(146518..148032)
DNA (1515bp) protein (505aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5U736_9PLAN
berkeley_reactor_200306_planktonic_scaffold_202757_103
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(148066..149751)
DNA (1686bp) protein (562aa)
Ribulokinase {ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|SAAS:SAAS00183333};; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
L-ribulokinase n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5U7J5_9PLAN
carbohydrate kinase FGGY
berkeley_reactor_200306_planktonic_scaffold_202757_104
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

149812..150873
DNA (1062bp) protein (354aa)
Transcriptional regulator n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AN90_9BACT
Transcriptional regulator {ECO:0000313|EMBL:EIP96481.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
LacI family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_202757_105
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(150901..153759)
DNA (2859bp) protein (953aa)
Heparinase II/III-like protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B2A4_9BACT
Heparinase II/III-like protein {ECO:0000313|EMBL:EIQ01396.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
heparinase
berkeley_reactor_200306_planktonic_scaffold_202757_106
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

153925..155073
DNA (1149bp) protein (383aa)
Transcriptional regulator, LacI family n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IUG5_9BACT
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AHF91252.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_202757_107
unknown

Not on your lists

comp(155102..155992)
DNA (891bp) protein (297aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_108
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

156131..157201
DNA (1071bp) protein (357aa)
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B2A3_9BACT
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EIQ01395.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hydroxyacid dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_202757_109
unknown

Not on your lists

157231..157941
DNA (711bp) protein (237aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_110
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

157946..159187
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D90B85
GDSL family lipase
Lipolytic enzyme, G-D-S-L family {ECO:0000313|EMBL:ABJ84957.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
berkeley_reactor_200306_planktonic_scaffold_202757_111
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

159239..160603
DNA (1365bp) protein (455aa)
Major facilitator superfamily MFS_1 n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IJW3_9BACT
MFS transporter
MFS transporter {ECO:0000313|EMBL:AHF92881.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_202757_112
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

160710..161318
DNA (609bp) protein (203aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AU99_9BACT
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EIP98590.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
type II secretion protein
berkeley_reactor_200306_planktonic_scaffold_202757_113
unknown

Not on your lists

comp(161460..162077)
DNA (618bp) protein (206aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_trna_1
unknown

Not on your lists

comp(161625..161695)
DNA (71bp)
transferRNA Gln
berkeley_reactor_200306_planktonic_scaffold_202757_114
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

162181..163089
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000373A9E1
LPS:glycosyltransferase
LPS:glycosyltransferase {ECO:0000313|EMBL:AFL88032.1}; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
berkeley_reactor_200306_planktonic_scaffold_202757_115
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(163203..165398)
DNA (2196bp) protein (732aa)
Alpha-L-rhamnosidase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NKE5_ROSCS
alpha-L-rhamnosidase
Alpha-L-rhamnosidase {ECO:0000313|EMBL:ABU57965.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
berkeley_reactor_200306_planktonic_scaffold_202757_116
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

Not on your lists

165533..166420
DNA (888bp) protein (296aa)
Transcriptional regulator, AraC family id=4420945 bin=GWF2_Lentisphaerae_50_93 species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
rhaR; L-rhamnose operon transcriptional activator
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
berkeley_reactor_200306_planktonic_scaffold_202757_117
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(166339..167469)
DNA (1131bp) protein (377aa)
Transcriptional regulator, LacI family n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IUM4_9BACT
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AHF91298.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_202757_118
Vibrio coralliilyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167573..168625
DNA (1053bp) protein (351aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW19991.1}; TaxID=190893 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio coralliilyticus.;"
berkeley_reactor_200306_planktonic_scaffold_202757_119
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

168651..170690
DNA (2040bp) protein (680aa)
Glycoside hydrolase family 71 n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DUF1_9BURK
glycoside hydrolase family 71
Tax=CG_Arma_02
Displaying items 91-120 of 124 in total

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