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berkeley_reactor_200306_planktonic_scaffold_202757

Search features with annotation key words

Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_202757_1
unknown

Not on your lists

2..337
DNA (336bp) protein (112aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_2
unknown

Not on your lists

340..3345
DNA (3006bp) protein (1002aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_3
unknown

Not on your lists

comp(3318..3431)
DNA (114bp) protein (38aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_4
unknown

Not on your lists

3601..3924
DNA (324bp) protein (108aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_5
unknown

Not on your lists

4409..4621
DNA (213bp) protein (71aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_6
unknown

Not on your lists

5107..5310
DNA (204bp) protein (68aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_7
unknown

Not on your lists

5708..6037
DNA (330bp) protein (110aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_8
unknown

Not on your lists

6037..6246
DNA (210bp) protein (70aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_9
unknown

Not on your lists

6312..6848
DNA (537bp) protein (179aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_10
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

7151..8230
DNA (1080bp) protein (360aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IWF8_9BACT
Putative regulator of cell autolysis {ECO:0000313|EMBL:EIQ01322.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
Sensor protein lytS
berkeley_reactor_200306_planktonic_scaffold_202757_11
unknown

Not on your lists

comp(8269..8832)
DNA (564bp) protein (188aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_12
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

8987..9808
DNA (822bp) protein (274aa)
Acyl-CoA thioesterase I n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IXP4_9BACT
acyl-CoA thioesterase
Acyl-CoA thioesterase {ECO:0000313|EMBL:AHF93743.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_202757_13
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

10112..11182
DNA (1071bp) protein (357aa)
Putative uncharacterized protein id=4455590 bin=GWF2_Lentisphaerae_49_21 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
oxidoreductase domain-containing protein
Tax=GWF2_Lentisphaerae_49_21_curated
berkeley_reactor_200306_planktonic_scaffold_202757_14
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11179..11931)
DNA (753bp) protein (251aa)
Putative uncharacterized protein id=2778509 bin=GWF2_Lentisphaerae_50_93 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_50_93_curated
berkeley_reactor_200306_planktonic_scaffold_202757_15
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11928..13646)
DNA (1719bp) protein (573aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=591159 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;"
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X0J7_STRVR
berkeley_reactor_200306_planktonic_scaffold_202757_16
unknown

Not on your lists

comp(13643..14719)
DNA (1077bp) protein (359aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_17
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14709..18335)
DNA (3627bp) protein (1209aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TNU4_BACOV
hypothetical protein
Tax=CG_Paludi_01
berkeley_reactor_200306_planktonic_scaffold_202757_18
unknown

Not on your lists

comp(18332..19102)
DNA (771bp) protein (257aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_19
unknown

Not on your lists

comp(19099..22899)
DNA (3801bp) protein (1267aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_20
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

23083..25521
DNA (2439bp) protein (813aa)
Autotransporter-associated beta strand repeat protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4I4_9BACT
PEP-CTERM motif protein
Autotransporter-associated beta strand repeat protein {ECO:0000313|EMBL:EDY18785.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_202757_21
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

25622..26734
DNA (1113bp) protein (371aa)
Transcriptional regulator, GntR family with LacI sensor n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IS44_9BACT
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AHF90466.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_202757_22
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26731..27699)
DNA (969bp) protein (323aa)
Oxidoreductase domain protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZX78_MAHA5
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEE96535.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
berkeley_reactor_200306_planktonic_scaffold_202757_23
unknown

Not on your lists

comp(27687..30605)
DNA (2919bp) protein (973aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_24
unknown

Not on your lists

comp(30584..31243)
DNA (660bp) protein (220aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(31237..34626)
DNA (3390bp) protein (1130aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYS3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20614.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_202757_26
unknown

Not on your lists

comp(34623..35414)
DNA (792bp) protein (264aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_202757_27
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(35411..35857)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYS1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20612.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_202757_28
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(35864..36505)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYS0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20611.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
berkeley_reactor_200306_planktonic_scaffold_202757_29
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

36608..38587
DNA (1980bp) protein (660aa)
Na+/solute symporter n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IVH2_9BACT
sodium:proline symporter
Sodium:proline symporter {ECO:0000313|EMBL:AHF91564.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
berkeley_reactor_200306_planktonic_scaffold_202757_30
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

38845..39660
DNA (816bp) protein (272aa)
1-alkyl-2-acetylglycerophosphocholine esterase id=3811523 bin=GWF2_Lentisphaerae_49_21 species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
GDSL-like lipase/acylhydrolase domain-containing protein
Tax=GWF2_Lentisphaerae_49_21_curated
Displaying items 1-30 of 124 in total

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