ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_202757_17

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(14709..18335)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL03T12C18 RepID=I9TNU4_BACOV similarity UNIREF
DB: UNIREF100
  • Identity: 45.9
  • Coverage: 1223.0
  • Bit_score: 1053
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 49.6
  • Coverage: 834.0
  • Bit_score: 796
  • Evalue 6.90e-228
Tax=CG_Paludi_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 1221.0
  • Bit_score: 1145
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Paludi_01 → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3627
ATGAGGCTCAGCCAATACACCCTCCCCGCCCTCGCCGCCGCTCTGGCGCTGACCGGCTCCGCCCTGGCCCAGATGAAGACAGGCGAGCAGATGAAGAACTACGAGGAGGTCTTCGGAGTGAAGATCAACCAGCGCACCTACCCCTTTGAGGTCACCCTGCTCGAGGGAACGCCCGAGGGCAACGTGCTCTACCCGGGAGAGCAGCCGCGGCTCAAGCTGCTCTTTACCAACAAGACGGACGCGCCGATCAAGACCGAGGCGAAGATGGAGGTCATTCCCTTTGGCACCAGGGGAATCCCGGGCGACATCTGGCTGCCGGAGTTGGTAAGACAAGGCGACCCGATGCCGGGCAAGGTGGCGCTGGACATTCCAGCCAACGGTTCGCAGATCGTCGAGTTTGCGCCAAAGATCCCGGAGAAGTTTGGCGCCTATGCGATCGTGGCCGACCTCGGAGCGACCGGCCGGCGGCTGGCCACGTCGTGTGCGCGCACGTTTGCCGCCTCCCCCGAGCGCATCCAGTACCCGACCCTGTCGCTCGACGACGCCGCGGGAGTGCCCATCCTGAAGCGGCTCGGCATCCAGGCGATCCGCATGGAGTTTGGGTACGTCCCGACCACGCAGAAGGACTACGAGAAGAAGATGGCGCTCCTCGACCAGCGATTGAAGGAGTACCAGGAAAACAACATCACGGTGCTGCTCGTCTTTAACAACGGTGGCGGCAATGAAACCCAGGCTCTCGGCCGCACCCGGCCGCATCTCGATGCCGACGGGGTGATGCTCGATACGAAGCAGGACTACGCCTGGCTGCCGCAGTACGATGCGGATTTCCAGAAGTTCGTGGCCGACACGTGCCGCAAGTACGGCTGGCCCAAGGGTCCCGTCACCGCCGTGGAGCTGTGGAATGAACCCTGGGAGGGCATCTCCATCTCGGGATGGGGTGCGGACTCCGAACGGTTTCGCGAGATTTTCACCGCAATGGCCAGGGGCGTCGAAGAGGCGCGCAAGGACGGTGCGGATGTGCTGATCGCCGGGTGCGACTCCTCGACGAACACCTTTGACAAGCTCTTCGCCGACGGGTCGGACACCTTTCTCAAGTGGCTCGACGTCTGCGCGATCCACTACCAGGGGCCATCGACGCCCTCCATTTATCGCAAGTGGATCGATCGCGACAGCCCGCGGGGACGAGTCAAGATCTGGGATACCGAAAGCTGGGTGGCCAATACGGATGATCGCGTCGCGGCGGTGATCGCGGCCAATCGCGCCTTTGGTTACGACCGCGCGATGGGCGTGTACTTTGGCAACGTCTCGAGGGAGATCAAAAAGGAGGTCGAGTTGCCCGACAAGACGCGGCAGAAGCTGCATAATTTTGACGCGTGGTCCACCGCAGCAGCGGTGGGCGCGGCCAATCACTTCCTGGGCGAGCGCCCCTTCCGCGAGCTTCTCTTCAAGAACGGGCTGCCGTGGGTGATGGTCTTTGACGGATTGAAAGGCCAGCCTGACGACGGAACGATCGTGGTGGTCGGCGACATGGGCGAGTCCTTTGAACCCGATCTCATGCTGTTCCGCCAGGTCGAAGGCCTGTCCGCGAGCAAGGAGCGGAAGGAAATCGAGGCCAAGCTCGCAGCGCTTCCCGCGCAGGCTCCCGAGCGCGAGGCGCTGGAAAAGAAACTCCAGAGCCGCCCGCCGCTCCAGGGGGCGACCCTCACGCTAAAAAACCCGGATGGGGAGTTTGTGCTGGCGGATTTCTATGGCAATCCAGTTCCCGGCAAGGGAGGCCAGATCACGGTGCCGCTGGACGGCCGGGGATTCTTTCTCCGTACGAATGGCAAGCCGGGATCCTTTGAGCGTCTCACCAAGGCCGTCGCGCAGGCCCGCATCGACGGCTACGAACCGGTGGACATCGTCGCCCACGACATGCTCACGCCGGTGGATCGCGAGTCTGAGCTGCGCCTCACGCTCACCAACATCCTGAACCGCCCGGTGCAGGGCACGCTGAAGGCCTCCCTCGGCGATCTCACTCTCGATCTGCCCAAGGAGGTCTCTCTCCAGGCTCATGAGACGCGTGAGATCAAGATCCCTGTAAAGGGAGGGACGCCGCGGCCCGACAACACATATCCGCTGAGCGTCGAGTTTGACGCCGGAAAGGATGGCAGCGCCGCGCACCGGGAGAGCCTGCACGTCAACCAGATCGCCAGGCGCACCATCGCGGTGGATGGAAACCTGGAGGACTGGAAGGGTGCACTGCCCCAGCCGGTCACAGCCGACGAGGATGGACCGACGGTCATGGAGGCCGCGTGGCTGCCCTTTGTCAAATACGACACCGGCAAGTCCTCCGGGACCGCCAGCGGATTCCTCGGCTATGATGACAAGGCCTTCTACTTCGCCGCGAAGATCCTCGATACCACGCCGTCGGACGGGACCCTGCGCTTCGCAAAGCGCGACCTGGACGCGGACTTCTACCCGGAGGTCTCGTACGAGTACGATGGTGAAAAGACCTTTCTGAAAAAGGACGAAACGTGGAACCAGCCGATCCGGGAGGCCGCCGCGCTCCAGATGCCCGGCGCGCCAGACCAGCGCAGCCATACAGCCTGGAGCAGCATCGCGAAGGCGCTCGCCGTCGATCTCTCCGTGGAAAAACCGACCACGGTGACCTTTTACTTTGTCGACTGGGACGGGCACAAGAACGGCAGACGCAATGTGCTCCTGGACCTCCAGGACCCCGCGACCGGGAAATCCCTGGCCCGCACCACCGTCGCAGAGTACGGACCCGGCAACCATGTGTCCTTCCTCGTCTCCGGCAAGGTGCGTGCCATCATCCGCACCCGCTCGTGGCTGGGGGCATCGCTGAGCGGCATTTTCCTCGATCCCGCCCCGCAGGGCGTGACCCTGAACGGCAGCCCGGCGGCCAGGCTCCTCGGCACCGACCTCAACACGAGCGGAAACTGGATCGGGAAATACGGACGCGACGGGTTTGTCGTGGCGGGGGCGGAGCCTCGGCTGCCAGATGGCTCGAGCGTGCGTTTCCTGGACGATGCCCCGCGGGTGGAGCATCGCTGGCCCGAGGGCGTGCGCCGGTATTCCTATCGTCAGCGTCCGGCGCTCCCCTTTGGCAGCGCGCCGAAGTTTGACAACGTGCAGATCGCCTTCAACGTGATCCCGGTCGGAGAAAAAGCATCCAGCATCTCACACCCTCCGGGAACGATGCCGCGCTTCATCCCCTATGAGGATACCGACTACGAGTATGCGCTGAATCCCGTGGCCGGAAAATACGGCGGAGGCACGGAAATCTGGCGCAGCCTCGTGCCGGGCATGGTGCGCAAGCACTTTTACCCGCGCCAGCCCGCCGCTCCCCAGGAGGGCGCGGTGGAAGACGGACAGCTCGCGATCAGGCACGAGGGCAATACGCGCATCATCGAGGCCGCCATCCCGTGGTCGGAGATTCCGCTCGTGAAGAAGGCGCTGGATGAAGGCAAGACGGTGAGATTTTCCTTCCGGGTCAACGACAATGGCGGCCCGGGCATGGAGCTCGCCGCCGGACGAAGCGTATCCAAGAAAAATCCCATGAGCTTCCATCCCGACTGGATCGCGCACTGGGCCAACGAAGTGGAGTTCAGCTTTGAAAAATAG
PROTEIN sequence
Length: 1209
MRLSQYTLPALAAALALTGSALAQMKTGEQMKNYEEVFGVKINQRTYPFEVTLLEGTPEGNVLYPGEQPRLKLLFTNKTDAPIKTEAKMEVIPFGTRGIPGDIWLPELVRQGDPMPGKVALDIPANGSQIVEFAPKIPEKFGAYAIVADLGATGRRLATSCARTFAASPERIQYPTLSLDDAAGVPILKRLGIQAIRMEFGYVPTTQKDYEKKMALLDQRLKEYQENNITVLLVFNNGGGNETQALGRTRPHLDADGVMLDTKQDYAWLPQYDADFQKFVADTCRKYGWPKGPVTAVELWNEPWEGISISGWGADSERFREIFTAMARGVEEARKDGADVLIAGCDSSTNTFDKLFADGSDTFLKWLDVCAIHYQGPSTPSIYRKWIDRDSPRGRVKIWDTESWVANTDDRVAAVIAANRAFGYDRAMGVYFGNVSREIKKEVELPDKTRQKLHNFDAWSTAAAVGAANHFLGERPFRELLFKNGLPWVMVFDGLKGQPDDGTIVVVGDMGESFEPDLMLFRQVEGLSASKERKEIEAKLAALPAQAPEREALEKKLQSRPPLQGATLTLKNPDGEFVLADFYGNPVPGKGGQITVPLDGRGFFLRTNGKPGSFERLTKAVAQARIDGYEPVDIVAHDMLTPVDRESELRLTLTNILNRPVQGTLKASLGDLTLDLPKEVSLQAHETREIKIPVKGGTPRPDNTYPLSVEFDAGKDGSAAHRESLHVNQIARRTIAVDGNLEDWKGALPQPVTADEDGPTVMEAAWLPFVKYDTGKSSGTASGFLGYDDKAFYFAAKILDTTPSDGTLRFAKRDLDADFYPEVSYEYDGEKTFLKKDETWNQPIREAAALQMPGAPDQRSHTAWSSIAKALAVDLSVEKPTTVTFYFVDWDGHKNGRRNVLLDLQDPATGKSLARTTVAEYGPGNHVSFLVSGKVRAIIRTRSWLGASLSGIFLDPAPQGVTLNGSPAARLLGTDLNTSGNWIGKYGRDGFVVAGAEPRLPDGSSVRFLDDAPRVEHRWPEGVRRYSYRQRPALPFGSAPKFDNVQIAFNVIPVGEKASSISHPPGTMPRFIPYEDTDYEYALNPVAGKYGGGTEIWRSLVPGMVRKHFYPRQPAAPQEGAVEDGQLAIRHEGNTRIIEAAIPWSEIPLVKKALDEGKTVRFSFRVNDNGGPGMELAAGRSVSKKNPMSFHPDWIAHWANEVEFSFEK*