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berkeley_reactor_200306_planktonic_scaffold_4894_62

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 58884..60767

Top 3 Functional Annotations

Value Algorithm Source
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBR5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 615.0
  • Bit_score: 887
  • Evalue 5.50e-255
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 615.0
  • Bit_score: 887
  • Evalue 7.60e-255
tRNA uridine 5-carboxymethylaminomethyl modification protein GidA similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 621.0
  • Bit_score: 744
  • Evalue 1.60e-212

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1884
ATGAGCGACTTTGTCTATCCCAAGACCTACGACGTGATCGTCCTCGGCGCCGGCCATGCCGGGATCGAGGCCGCCCTCGCGGCTGCCCGGCTGGGATGCGAAACGCTCCTGCTCACGCAAAATGCCGACACCGTGGGCCAGATGTCCTGCAACCCCGCCATCGGCGGGCTCGCCAAGGGCCACATGGTCCGGGAAATCGACGCTCTCGGCGGCGTGATGGGCATCAACACCGACGCGACGGGCATCCAGTTCCGCATGCTCAATGCCCGCAAGGGCCCCAGCGTGCGCGCCCCCCGCGCCCAGGCCGACAAAAAGGCCTACCAGTTTCGCCTCAAGGCCATCCTCGAGCGCGAGCCCCGGCTCGACCTGAAGCAGGGCAACGCCACCAGCCTCATTGCGGAGGATGGCGTCGTCACCGGCGTGGAGACCAATCTCGGACTGCGCTTCAATGGCCGCTCGGTCGTCGTGACCACTGGCACCTTCATGCGCGGACTGCTTCACGTGGGACTACGTAACCAGACCGGCGGCCGCATGGGCGACACCGTCTCGACCCTGAGCGACAGCCTGCGCGACCTCGGGTTTGAGGTCGGGCGCTTCAAGACCGGCACGCCCTGCCGCCTGCTCGCCAAGAGCATCGACCTCACGAAATGCGAACGCCAGGACGGCGACGAACCCGCCCCGGTCTTCAGCTACCTCGCCGACACCATCGAGCGCGGTCCGGATGACATTTTCACCCTCAATGGCTGGAAGGATGGCCGCCTCGACGTGCGCCAGATCCCGTGCTGGATCACGCATACGAACGAGACGACGCACGAAATCATCCGCGCCAATCTCGACAAATCACCCCTCTACGCAGGCGTGATCGAGGGCGTCGGCCCCCGGTATTGCCCCAGCATCGAGGACAAGGTGGTGAAATTCGCCGAAAAGGACGCCCACCAGCTCTTCCTCGAACCCGAGGGCCGCCAGACCGATGAGATTTACGTCAACGGCATCTCGACCAGCCTGCCATTTGAAGTGCAGTACCGCTTCATTCGCAGCGTACGCGGGCTGGAAAATGCCGAGATCCTCCGCCCCGGCTACGCGGTCGAGTACGACTACTGCCCGCCCACCCAACTCCATACCACGCTGGAGACGAAGCGCATCGGCGGCCTGTATTTCGCAGGACAAATCAACGGCACCTCCGGCTACGAGGAGGCCGCCGCGCAGGGCCTCATGGCCGGCGCGAATGCCGCGCTGAAGGTTCTCGGTCAGCCCGCCTTTGTCCTGGGCCGCCACGAGGCCTACATCGGCGTGCTCATCGACGATCTCGTCACCCGCGGCACACCCGAGCCGTACCGGATGTTTACCAGCCGCGCGGAACACCGTCTCCTCCTCCGCCAGGACAATGCCGACCTCCGCCTCACCGGCAAGGCCATTGCCCTCGGCCTCGCCTGCCCGGAGCGCGCCCGCCGTTTCCAGCAGAAGACCGAGCAAATCGCCGCCCTTCGCGCCCTCGCCCTCACCACGCGACTGGAAGGCGTCTCACTGGAAACCTGGCTAAAACGCCCGGAAGGCGAACCGCACAAGCTCCCCGCCGACCTTTACGCGCAATTCCCCGCCGAGGTGTGGGACTGCGTGGAAATCGACATCAAGTACGAGGGCTACATCCGCCGCGAGGAGGACCGCATCGCCCGCACCGTCCGCCAGGAGGGAAAGACCATTCCCGCCGGTATCGACTACGCCGCCATCAACGGCCTCCGCGCCGAAGCCGTCCAGAAGCTCACCAAGATCCGCCCCGAAACCCTCGGCCAGGCCGCCCGCATCTCCGGCGTCACCCCCGCCGATGTCGCCCTCCTAAGCGTCTGGGTGGCACGCGGCGATCTGTCGAAAGTGAGCGAGGAGTAG
PROTEIN sequence
Length: 628
MSDFVYPKTYDVIVLGAGHAGIEAALAAARLGCETLLLTQNADTVGQMSCNPAIGGLAKGHMVREIDALGGVMGINTDATGIQFRMLNARKGPSVRAPRAQADKKAYQFRLKAILEREPRLDLKQGNATSLIAEDGVVTGVETNLGLRFNGRSVVVTTGTFMRGLLHVGLRNQTGGRMGDTVSTLSDSLRDLGFEVGRFKTGTPCRLLAKSIDLTKCERQDGDEPAPVFSYLADTIERGPDDIFTLNGWKDGRLDVRQIPCWITHTNETTHEIIRANLDKSPLYAGVIEGVGPRYCPSIEDKVVKFAEKDAHQLFLEPEGRQTDEIYVNGISTSLPFEVQYRFIRSVRGLENAEILRPGYAVEYDYCPPTQLHTTLETKRIGGLYFAGQINGTSGYEEAAAQGLMAGANAALKVLGQPAFVLGRHEAYIGVLIDDLVTRGTPEPYRMFTSRAEHRLLLRQDNADLRLTGKAIALGLACPERARRFQQKTEQIAALRALALTTRLEGVSLETWLKRPEGEPHKLPADLYAQFPAEVWDCVEIDIKYEGYIRREEDRIARTVRQEGKTIPAGIDYAAINGLRAEAVQKLTKIRPETLGQAARISGVTPADVALLSVWVARGDLSKVSEE*