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berkeley_reactor_200306_planktonic_scaffold_59817_12

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(10270..10914)

Top 3 Functional Annotations

Value Algorithm Source
MarC integral membrane family protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWJ1_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 209.0
  • Bit_score: 147
  • Evalue 1.40e-32
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=160660 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Thiobacillus prosperus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 210.0
  • Bit_score: 151
  • Evalue 7.80e-34
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 213.0
  • Bit_score: 147
  • Evalue 3.00e-33

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Taxonomy

Thiobacillus prosperus → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGCAGGCGGGCAAGCTGATGCCCGGATTACCTGAAATACTCAAGGCGTTGATCGCCATCGTCGTACTCATCAATCCGCTCGAGGGGGTGCCGATTTATCTCTCGCGGGCGGCGAAGCTTTCGGATGCGGACCGGCTGAAGACGGCTCGCAAGGCTTCCATCACGGTGCTCATCCTGCTGCTGGCGGCGATGGCGGGGGGCAAGGCGGTGCTGTATCTCTTTGGCATCCAGATCGCGTCGTTCACCATGGCGGGCGGGCTGATCATTCTCCTCATCGCGCTGAACATGGTGCTGTCCTCGCCGAAGGATGATCCGTCGAGCGGAGGGAGCGGGGATTTTTCCATCGTGCCGCTGGGCACCCCCCTGCTGGCGGGGCCGGGGCCGATCAGCAGTGTGATCATTTTTTCCAGCCAGGGAATCGGCGGCCACGACACGCTCTGGATGAGCGACGTGGTGCTGCTCGCGATCATCATCGCGGCGTCGGCGATCACGTACCTGTGCCTGCGCGTGGCGATTCCCGTCGGCAAGCTGCTCGGCACGACGGGCATCAATGTGATGACCCGGCTGGCCGGCATCCTCGTCGCAGCTATCGCGGTGCAGATGATCGTGAGCGGCGCGCTGAAGTCCTTCCCCGCCTGGCAGTGA
PROTEIN sequence
Length: 215
MQAGKLMPGLPEILKALIAIVVLINPLEGVPIYLSRAAKLSDADRLKTARKASITVLILLLAAMAGGKAVLYLFGIQIASFTMAGGLIILLIALNMVLSSPKDDPSSGGSGDFSIVPLGTPLLAGPGPISSVIIFSSQGIGGHDTLWMSDVVLLAIIIAASAITYLCLRVAIPVGKLLGTTGINVMTRLAGILVAAIAVQMIVSGALKSFPAWQ*