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berkeley_reactor_200306_planktonic_scaffold_59817_17

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 16461..17918

Top 3 Functional Annotations

Value Algorithm Source
glutamyl-tRNA amidotransferase subunit B n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174552C similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 487.0
  • Bit_score: 611
  • Evalue 5.80e-172
gatB; Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit similarity KEGG
DB: KEGG
  • Identity: 58.4
  • Coverage: 483.0
  • Bit_score: 558
  • Evalue 1.70e-156
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 488.0
  • Bit_score: 667
  • Evalue 1.30e-188

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Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1458
ATGCCCGACTACATCGCCACCATCGGCCTCGAGGTTCACGTCCAGCTCAAGACCCGCACCAAGATGTTCTGCTCCTGCGCGGTCGAGTACGGCGCCGAGCCCAATACGAATGTCTGCCCCGTCTGCCTCGGCCTCCCCGGCGCGCTCCCCGTCATGAACGATGAGGCCCTCCGCCTCACCGCCCTCGCGGGACTCATGCTCGGCTGCGAAACCCCGGTCACCTGCAAGTTTGACCGCAAGAACTACTTCTACCCGGACATGCCGAAGAACTACCAGATCAGCCAGTACGATCTGCCCCTCTGCCTCGGCGGCTCCGTCCCGCTCCACGACCTCGCCTACCCGAAGGACGTGCAGAAAAACATCGCGACCAAGGACAAAAAAATCCGCCTCACCCGCATCCACCTCGAGGAGGACGTCGCCAAGAGCTTCCACATGGAAAGCTCCACCGGTATCGACTACAACCGCGCCGGCACCCCGCTCGTCGAGATCGTCAGCGAGCCCGACATCGCCAGCGCCGAGGAGGCCTTTGCCTACCTCACCGTCCTCCAGCAGGTCATGATCTACGGCGGCATCTCCGACGCCGACATGGAAAAAGGCCAGCTCCGTTGCGACGTGAACGTCTCCGTGCGCCCTTCCACCAGCGACAAATGGGGCACCAAGATCGAGCTGAAGAATCTCAACTCCATCTCCGGCGTCCGCCGCGCCCTCCTTTTTGAAATCCCGCGCCAGATCGAGGCCCTCGAGCGCGGCGAGGTGCTCCAGCAGGAGACCCGCCGCTGGGACGACGTCCGCGGCGAAACCACCCTCATGCGCATCAAGGAAAGCGCGCACGACTACCGCTACTTCCCCGACCCCGACCTGCTCCCGGTCAAGACCGCCCACCTCATCGAGGACGCGGTTTCCCGCAAGCCCGAGCTGCCCTGGGAAAAGCGCGCCCGTTACGTGAGCGAATACGCCGTCACGGAATACGACGCCGCCGTCCTCTCCAACGACCTGCCCACCTCCCGCTACTTCGAGACCGCCGCCCGGGGCGCGAAGAAGCCCAAGAGCATCGCCAACTGGATTCTCAACGACCTCCAGAGCGCCCTCGCCGGAGCCAGCAAATCCATCGCCGACTGCCCCGTCGCCCCCGAGGCCCTCGACGAACTCGTAAATCTCATCGACGACGGCAAGATCAACTCCCGCCAGGGCAAGGAAGTCTTCGCCGAGATGTTCACCTCCGGCAAAGGAGCCGCCGTCATCGTGAAGGAAAAGGGCATGGAGCAGGTCAGCGACACCGGAGCCATCGAGGCCCTCTGCGACCAGGCCATCGCCAACAGCGAGAAGGCCGTCGCCGAGTACAAGGCGGGCAAACTCGCCGCCATCAACGCCATCAAGGGCCAGGTCATGAAGCTCTCCAAGGGCCAGGCCAACCCCGCCCTCGTCGGCGAAATCCTCGAGAAAAAACTCGCCTCGTAG
PROTEIN sequence
Length: 486
MPDYIATIGLEVHVQLKTRTKMFCSCAVEYGAEPNTNVCPVCLGLPGALPVMNDEALRLTALAGLMLGCETPVTCKFDRKNYFYPDMPKNYQISQYDLPLCLGGSVPLHDLAYPKDVQKNIATKDKKIRLTRIHLEEDVAKSFHMESSTGIDYNRAGTPLVEIVSEPDIASAEEAFAYLTVLQQVMIYGGISDADMEKGQLRCDVNVSVRPSTSDKWGTKIELKNLNSISGVRRALLFEIPRQIEALERGEVLQQETRRWDDVRGETTLMRIKESAHDYRYFPDPDLLPVKTAHLIEDAVSRKPELPWEKRARYVSEYAVTEYDAAVLSNDLPTSRYFETAARGAKKPKSIANWILNDLQSALAGASKSIADCPVAPEALDELVNLIDDGKINSRQGKEVFAEMFTSGKGAAVIVKEKGMEQVSDTGAIEALCDQAIANSEKAVAEYKAGKLAAINAIKGQVMKLSKGQANPALVGEILEKKLAS*