ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_59817_24

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(27697..30558)

Top 3 Functional Annotations

Value Algorithm Source
Type III restriction protein res subunit id=1821236 bin=GWB2_Nitrospirae_rel_47_37 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 936.0
  • Bit_score: 1008
  • Evalue 4.20e-291
type I site-specific deoxyribonuclease similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 919.0
  • Bit_score: 945
  • Evalue 9.50e-273
Tax=GWB2_Nitrospirae_47_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 936.0
  • Bit_score: 1008
  • Evalue 5.90e-291

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB2_Nitrospirae_47_37_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 2862
ATGGCATGTCCGATGCCCTCCCTGCGGTGGGAAAGGCGCCTGTTTCCTTGGCTGGACGGTGAAGGGGCGGTTTTGGTAAGTTTTGCGTTCTTTCAGATGTCGGCCAGCACCCCGGAAAATAAAGCGCGAGAGCAGATCGATGCGATGCTTCGCGCATCGGGTTGGGCTGTGCAGTCCAAGGATGCCGTCAACCTCCTCGCCCAGCCCGGTGTGGCTGTGTGCGAGCTGTCTTTTTCCACGGGGGAGCCCGATTACACGCTCTTCGTCGATGGCCGGGCTCTCGGCACTATCGAGGCCAAGCCTGTCGGCCATTCGCTCGTCGGGGTGGAGGATCAGTCGGCAAAGTACGCCACGGGCCTCCCGCCGGGTGTGCCTGCCTGGCGCAAGCCGCTGCCCTTTTGCTACGAGTCCACAGGCGCGGAGACGTGCTTTACGAACCGCCTGGACCCCGAGCCGCGCAGCCGCCTTGTCTTTGCCTTTCACCGCCCGGAGACTCTGCTCACCTGGGCGCAGGAGGAGAAATCCCTCGCCCGCCGGTTGCAGGAGTACCCCGTCCTGCACACGGAGAGGCTCTGGGGCGCGCAGATCGAGGCCATTACGAACCTGGAGACCTTTCTCGCTGGGGGGAAGCGGCGCGTGCTCATCCAGATGGCGACGGGATCAGGCAAGACATTCACGGCGGTGAACTTCATCTACCGCCTCATCAAGTACGCCGGGGCCAAACGCATCCTCTTTCTCGTGGATCGGGGCAACCTCGGCGGGCAGGCCATGACGGAGTTTGAGAGTTTTGAGTCTCCGGTGAACAACTACAAGTTTACGCAGGAGTACATCGTCCAGCACTTGCAGAGCAACACGCTCGACGGCTCGGCCAATGTCGTCATCGGCACGATCCAGCGCATTTACTCCATGCTGCGCGGCGAGCAGGAGGCGGCGCCCGATCTCGACGATCTCGCCATCGACGCTGCCGAGGCGCTGTACAAAAAGCCCGTCCCGGTGGAGTACAACCCCGCCTTTCCCATCGAGACGTTTGACTTCATCGTCACCGACGAGTGCCACCGCTCGATCTACAATCTCTGGCGGCAGGTGCTGGAGTACTTTGACGCCACGCTCATCGGCCTCACCGCCACGCCGTCCAAGCAGACGATCGGCTTCTTCCAGCAAAACCTCGCCCAGGAGTACAGCCACGAAAAGGCCGTAGTCGATGGCGTGAATGTGGGAGCCGACATCTACCGTATCAATACGCAGATCACCCAGGGCGGGTCCAAGGTCGAGGCGGGCTACTGGGTGGACCGGCGCGACCGGCAGACGCGCAAGGTGCGCTGGGAGCAGCTCGACGACGTGCTCGACTACAGCGCCAGCGATCTCGACCGCGCCGTCGTCGCGCCCGACCAGATCCAGCTCGTGCTCTCCACCTTCCGCGACCGTGTGTTTACCGAGATGTTCCCGGGCCGTGCGGACCTGCCCAAGACGCTCATCTTTGCCAAGGACGACGCTCACGCCGATGACATCGTGCGCATCTGCCGCGAGGTCTTTGGCAAGGGCAACGACTTCTGCAAAAAGATCACCTACAAGACCACGGGCGACACGCCGAAGAACCTCATCAAGCAGTTTCGCAATAGCTACAACCCCCGCATCGCCGTGACGGTGGACATGATCGCCACCGGCACGGACATCAAGCCGCTCGAGATCGTCTTCTTCATGCGCAGCGTCGCGTCGAAGAATTTCTTTGAGCAAATGAAAGGCCGCGGCGTGCGCGTCGTCTCCGAGACCGAGATGGAGCAGGTGAATCCCGGCGTGAAGCGCAAGACCCGCTATGTCATTGTCGATGCCGTGGGCGTGACCGAGCGCGTGCAGACGGAATCCCGTCCGCTGGAGCAAAAGCCCGCCGTGAGCTTTGACAAGCTCCTCGACGCCGCCGCGCTCGGCACCACCGAGGTTCCCGCCATCGAGTCCCTCGCCGGGCGGCTCATCCGGCTCGATCGCCGCTTTGACGATGCGGTGAAGGCCGAGGTCACGCAGACCGCCGGGGGCCTCACGCTCCCCGACATCGCGCGCGGGCTCCTCTCCGCCATCGACCCCGACGAGATTCTCGCACAAGCCCGGGCGGGTCTGCCCGACTACGCCGAGCCGACCGAGAAGGCCGTTGCCGCCGCACGCGAGGCCCGCATCAAAGAGGCGCTCATCCCGCTGGCGGGCAATCCCGACCTGCGCAACCTGCTCAAGAAGGTCGCCCGGGCCGCCGACCAGACCATCGACATCATCTCGCGGGATTCCCTCATCTACGCCGGCCCCGCCCCCGCCGCGCAGCAGGCGGGGGCGCAGCTCGCCACCTCCTTCCGCGCCTACATCGAGCAGCACCAGGCCGAGATCACCGCGCTCCAGCTCCTTTACTCCCGCCCGTACCGCCAGCGCCTCACCGAGCCAATGCTCAAGGAGCTCGAGGGCAAGCTCCGCGACCAGCACGCGGGCTGGACGGAGGACAACCTCTGGAACGCCTTTGCCGCCGCCCACCCCGGCCACGTGAAGGGCCGCTCGCAGGCCGGGCGCTTCGCCGACCTCGTCGCACTCGTGCGCTTTGCCCTGGAGCAGCAGCCCGTGCTCGAGCCCTTTGCGGAGTCCGTCTCCACGCGCTTCCACGAATGGCTCATGGACAAGGCCCAGGCCGGAGTGACCTTCACCCCCGACCAGCTCGCCTGGCTCAATCTCATCCGTGACCACATCGCCACCGCCATCAGCATCGACCCGGAAGACTTCGACTACGCCCCCTTTGTCCAGCGCGGCGGCCTCGGCAAAGCCCACCAGCTCTTCGGCGACCAACTCGACGCCCTGCTCGAGGAACTCAACGAGGTGCTGACGGCGTGA
PROTEIN sequence
Length: 954
MACPMPSLRWERRLFPWLDGEGAVLVSFAFFQMSASTPENKAREQIDAMLRASGWAVQSKDAVNLLAQPGVAVCELSFSTGEPDYTLFVDGRALGTIEAKPVGHSLVGVEDQSAKYATGLPPGVPAWRKPLPFCYESTGAETCFTNRLDPEPRSRLVFAFHRPETLLTWAQEEKSLARRLQEYPVLHTERLWGAQIEAITNLETFLAGGKRRVLIQMATGSGKTFTAVNFIYRLIKYAGAKRILFLVDRGNLGGQAMTEFESFESPVNNYKFTQEYIVQHLQSNTLDGSANVVIGTIQRIYSMLRGEQEAAPDLDDLAIDAAEALYKKPVPVEYNPAFPIETFDFIVTDECHRSIYNLWRQVLEYFDATLIGLTATPSKQTIGFFQQNLAQEYSHEKAVVDGVNVGADIYRINTQITQGGSKVEAGYWVDRRDRQTRKVRWEQLDDVLDYSASDLDRAVVAPDQIQLVLSTFRDRVFTEMFPGRADLPKTLIFAKDDAHADDIVRICREVFGKGNDFCKKITYKTTGDTPKNLIKQFRNSYNPRIAVTVDMIATGTDIKPLEIVFFMRSVASKNFFEQMKGRGVRVVSETEMEQVNPGVKRKTRYVIVDAVGVTERVQTESRPLEQKPAVSFDKLLDAAALGTTEVPAIESLAGRLIRLDRRFDDAVKAEVTQTAGGLTLPDIARGLLSAIDPDEILAQARAGLPDYAEPTEKAVAAAREARIKEALIPLAGNPDLRNLLKKVARAADQTIDIISRDSLIYAGPAPAAQQAGAQLATSFRAYIEQHQAEITALQLLYSRPYRQRLTEPMLKELEGKLRDQHAGWTEDNLWNAFAAAHPGHVKGRSQAGRFADLVALVRFALEQQPVLEPFAESVSTRFHEWLMDKAQAGVTFTPDQLAWLNLIRDHIATAISIDPEDFDYAPFVQRGGLGKAHQLFGDQLDALLEELNEVLTA*