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berkeley_reactor_200306_planktonic_scaffold_122971_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(26264..27886)

Top 3 Functional Annotations

Value Algorithm Source
Rho termination factor, N-terminal domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7L6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 32.0
  • Coverage: 306.0
  • Bit_score: 156
  • Evalue 4.40e-35
Rho termination factor, N-terminal domain protein {ECO:0000313|EMBL:EDY17633.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.0
  • Coverage: 306.0
  • Bit_score: 156
  • Evalue 6.10e-35
Rho termination factor domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 27.6
  • Coverage: 409.0
  • Bit_score: 107
  • Evalue 1.10e-20

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1623
ATGAGCAAGAATGAAAAAGGTGGGGCTGACGAGGTCAAAGGGTTTCAGTTGCGCGAAACTCCGATCATCGAGAGTCCCGTAGGATCATCCCCGGTGCCTCAACCTATGGCGGAGCGCGAAACCGATGCCCTTGATCAACTCGGAGATCTGCCTCACTCGTATGGTTCCGACACGATCTTTCTGGTCGCCCAGGAACCCAAGTGGCTTTTTACCTACTGGGATATCGACATCTCAAGGCATCCCGGAGGACAGGCACAACTGCGGGTCTATCGGGGAGAATCGGAATTGGAATCCGAGATCGACGTCCCTTTTGAAACTCGCAACTGGTATATTCCCGTCAAGGAAGCCGGAGCGAGCTATACGGTCGAAATCGGGTACTACCGAGGACAGGCCTGGCATACGATCTCCCGGTCCGTCACGGTTCAGACACCTTCAGACAAGGTTTCGGACTCCGAGAGTTTCGACTACGCCAGCATCCCGCTGCACCTGAGTTTCCAAAAACTGACGGATAGCATCGAAACAGCCATCCGCTCCGGCGAATCCCTTATCGAAGCGATTTCCCGTCTTCAACGTGAAGGCCACATCGCCTCGCATGTCACGCCTTCGAGCTTTGCAGAGCTGGTCAGCGTCCAGCGTGCCTTGCTTGAGTCGCTGATCGGGGCGCCCCTGCTGGAGGAACTGACCAGTGGAGGTCTTTCATCCGCAGAGATCGACTCTCGCATTCGCACCTATCTCGAGGAACGCCTCAGCAGCGCAGGAGCCAGCGAATGGTTCAGCAGCGAGCTTTTACATTCCGCAGGATTGAGCGGCCTCGGGCTGTCTAGCGCTCTCTCGTCGGGTGAGGTCGGGTCAAGCTGGAATATCGGAGCACTCTCCAGTTGGGCGTCCGGAGCACTGACGAGCTGGATTTCTGCCGCTGGTGCTGGCGCCAGTTGGACATCACAGTCCAGTTGGAATCTCGTTGCGACGACCAGTTGGGCCGTGGAATCGCTCGGCAGTTGGTCCCAGGCAGCTGTCTCAAGCTGGGGTGCTGCCGCGGTCACGAGTTGGCTGCATGCCTTGCAGTCCAGTTGGTTCCAGGCCGCACAAACAAGCTGGATTCAGGCTGGTCAGACGAGTTGGTCACAGGCAGCCCAGTCGAGCTGGCTGCAAAAGGCAGAGACAAGCTGGCTGCAAGCCGCTCAAGCCAACTGGTCACAGGCTGCACAATCGAGTTGGGCGGCAGGTGCATTATCCAGTTGGAATCAGGCGACCCTGTCGAGTTGGACCACTGCAGCAACATCGAGCTGGGGCGGAGCGTCAGAGAGCTTGAGTTCGCCCGGCTTCGGAAATCGCGGATTCTTCATGCACGTCAACGCAGAGGTCATCTTCTACGGAGGCACAGACCCTCGCGCTACCGTGACGATCGATGGAAAGAGGATCGCGTTAAATCCCGACGGCACGTTCCGGTATCACTTCGTCTTTCCCGACGGAAAATACGAGATTCCCATCGTGGCAACTTCTCCCGATGGCGTAGAAACACGCTCGGCAATCCTGCGCTTCGAACGAGACACCCAGAAATATGGCGAGGTCACCGATACGGCTCAGCCTCCGCTCCCCTCGCCTATCGGACCCGTATCCTGA
PROTEIN sequence
Length: 541
MSKNEKGGADEVKGFQLRETPIIESPVGSSPVPQPMAERETDALDQLGDLPHSYGSDTIFLVAQEPKWLFTYWDIDISRHPGGQAQLRVYRGESELESEIDVPFETRNWYIPVKEAGASYTVEIGYYRGQAWHTISRSVTVQTPSDKVSDSESFDYASIPLHLSFQKLTDSIETAIRSGESLIEAISRLQREGHIASHVTPSSFAELVSVQRALLESLIGAPLLEELTSGGLSSAEIDSRIRTYLEERLSSAGASEWFSSELLHSAGLSGLGLSSALSSGEVGSSWNIGALSSWASGALTSWISAAGAGASWTSQSSWNLVATTSWAVESLGSWSQAAVSSWGAAAVTSWLHALQSSWFQAAQTSWIQAGQTSWSQAAQSSWLQKAETSWLQAAQANWSQAAQSSWAAGALSSWNQATLSSWTTAATSSWGGASESLSSPGFGNRGFFMHVNAEVIFYGGTDPRATVTIDGKRIALNPDGTFRYHFVFPDGKYEIPIVATSPDGVETRSAILRFERDTQKYGEVTDTAQPPLPSPIGPVS*