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berkeley_reactor_200306_planktonic_scaffold_122971_75

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(82104..82940)

Top 3 Functional Annotations

Value Algorithm Source
YadA/haemagluttinin like protein similarity KEGG
DB: KEGG
  • Identity: 22.6
  • Coverage: 283.0
  • Bit_score: 58
  • Evalue 3.10e-06

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Notes

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 837
ATGAACCAAACACCCGCCATCAAGATCCCCAGCTTCACGGCTGTCAGCGCCCTCGCCATCGGCCTCCTTTTCGCCGCAGGCGCGCAGGCTGCGCCGTTGTACACGGACCAGAATTTCTCGACCTTTCCGACAGGCTGGACGCTCTCCACACCCACGAACACCTCGATCTCCGTGGCGTCCGGAGCGCCGGCGACCGGTACCGACACCAACAACCTGCACTTTGTCGATAACACCAATGCCGCGCTCGCATCCGGCAAGGTGAACATCGATGGCGGCACTCCGCAGACGGGGTCGATCACCCTTTCGTTCGACATCAAGATGACACTCGTGATGGTGGATGCCTCGACCAACCAGTACAACAAGATGGTGATGCGGATTTACGACAGCTCCGGAATCACAAACAGCGCCCACACCGCGGTCGGTATGACCTTTTCCCGTAGCGCTGGCGCCGGGAACAGCTCCTCCAAGCTGACCTTCGGCGACCAAGGAGGCACCTCCGTCGGCTTCTTCGAGCCCGGCTCATGGTACAATATCTCCATCACGCTCCCGGCCATCGGGACCACGGCCACATCCGTCATCACCATCACCGGTCTCGATGGCGCCAAGGTCTACAACTCTTCGAACACGCTCGTCTCCTCGCTCTCCGTCAGTCAGGCCTTTGGAAACAGTGTGACGAACTTCTCGTCCCTTTCCCTGGCGACGGGATCATCCGGGGAGAACACCTCGTATGCGGATGCGAATATCTCGAACATCGTTTCCGTTCCCGAGCCTTCCGCCGGCCTGAGCATCCTGGTGGGATCGGGCCTTCTCTTCATGCTGCGCCGCCGACTCCGGTAA
PROTEIN sequence
Length: 279
MNQTPAIKIPSFTAVSALAIGLLFAAGAQAAPLYTDQNFSTFPTGWTLSTPTNTSISVASGAPATGTDTNNLHFVDNTNAALASGKVNIDGGTPQTGSITLSFDIKMTLVMVDASTNQYNKMVMRIYDSSGITNSAHTAVGMTFSRSAGAGNSSSKLTFGDQGGTSVGFFEPGSWYNISITLPAIGTTATSVITITGLDGAKVYNSSNTLVSSLSVSQAFGNSVTNFSSLSLATGSSGENTSYADANISNIVSVPEPSAGLSILVGSGLLFMLRRRLR*