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berkeley_reactor_200306_planktonic_scaffold_136582_9

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(9025..9990)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AS86_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.8
  • Coverage: 292.0
  • Bit_score: 223
  • Evalue 1.70e-55
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EIP97877.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 292.0
  • Bit_score: 223
  • Evalue 2.40e-55
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 292.0
  • Bit_score: 222
  • Evalue 1.40e-55

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Taxonomy

Opitutaceae bacterium TAV1 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 966
ATGGACTTGGAAAACAGATATATGGATTATACGCATGATTCAGTTGCGCCCTGTGATATACTGAATCCAGATTTTCCCATGTCCCTCACCTCCTTCTCCCCATTGGATTGCCTTGCGGAATTGCTTCGGGCACGAATCGCGTTCAATCATGTCCTGATCAGGAAGTTTCCCGTCGGTTATGAGACATCCGATGAGATCATCACCACTCACCGCTTCATGCTGGTTCTGCGTGGGGAACTGCACTATACTGTGGAAGGCCGCATGAACAGGGCTCGTGTGGGGCAACAGATTTTCGTGCCAGCATGGGCTCGCCGTAGTTGGCGTCCTCGCCCCGGAACGACATGCGAATGTATATGGTGCGAATTCTCAGCGGCAGGTTTTGACCTGAATCTGCACACCCTCTTTTTGAGGACCTGCAAAAATCCCGGCTTGGAGCGTGCAACGCTGGAACGCATGTTGAAACTCTGGCCTGGAGAGCGAGTTATTCTCGAAGTTCGAGGACGGTTGCTGCCGGAAAGCGCCCTGCCAAGAGAAAGCCAACTTCGGTTGGAAGGAGAACTCAAAGCCATGCTTGCGCGTTTTTGGCCGGAAGCGGTTCCGGGCAATCCTACCGCGTTAATTGATCCCGTGCCCGGCCAGACAATCCATCCAGACTTGAAGCATGCCTTGCTCTGGATGAATGAAAACTTTTGGAAAACCGATGCATTGAAATCTCTCTATGAAGAGATCAATTTAAGTCCCAATCATTTCCGTCTTCTCTTTGTTCGCGTATTGGGCTGTAGCCCGCAAAGTTATCTCATCCATTTGAGGTTGAGGCGTGCGCGCTCCCTGGTGCTCGACAGCGACAAGCTCATCAAAGAGATTGCGGCATTCGTGGGCTTCTCCGACCCGCTTTTCTTTTCGAGGCAATACCTTCACTTTTGGGGAAAAAGTCCGCGCGCGGATCGAGAACAATCCAACGCTTAA
PROTEIN sequence
Length: 322
MDLENRYMDYTHDSVAPCDILNPDFPMSLTSFSPLDCLAELLRARIAFNHVLIRKFPVGYETSDEIITTHRFMLVLRGELHYTVEGRMNRARVGQQIFVPAWARRSWRPRPGTTCECIWCEFSAAGFDLNLHTLFLRTCKNPGLERATLERMLKLWPGERVILEVRGRLLPESALPRESQLRLEGELKAMLARFWPEAVPGNPTALIDPVPGQTIHPDLKHALLWMNENFWKTDALKSLYEEINLSPNHFRLLFVRVLGCSPQSYLIHLRLRRARSLVLDSDKLIKEIAAFVGFSDPLFFSRQYLHFWGKSPRADREQSNA*