ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_136582_23

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 24467..25675

Top 3 Functional Annotations

Value Algorithm Source
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LFR5_SYNFM similarity UNIREF
DB: UNIREF100
  • Identity: 37.8
  • Coverage: 341.0
  • Bit_score: 209
  • Evalue 3.20e-51
PpiC-type peptidyl-prolyl cis-trans isomerase similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 341.0
  • Bit_score: 209
  • Evalue 9.20e-52
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.2
  • Coverage: 400.0
  • Bit_score: 323
  • Evalue 2.20e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1209
ATGCCAAACAAACTGAACTCCATTTCAATGAAGAAATCCCTCTCCCTCGTGTTGTGCACGGCTACGGCCGCCGCAGCCACGCTCGCCATGACCTCCTGCAAGCCGTCTCAGCCTGCGGCCTCCGAACCCGCCGCAGCACCTTCCGCCAGCCCGGTTGCAGCAGCAGCCAGCCCCGCACCGGCTGCCTCCGCGACTCCTGCGGATGCGAGCGCCCCGGCTTCGCCCCTTGGTCTGAAGGACCCGGTTGCCGTCGTCAATGGGGAGCCGATTTCGCTCAAGGAGCTTCAGGAAGCCTTTGAGACCGCGGTGAAATCCTCCGGGGTTGACGCCGCCAGCCTCACCGATGCCCAAAAAATCGAGGGTTATCACCAGCTTCTCGATGAGCTGATCGTTGACAAGCTCATCGCCAAGCAGGCGGCTAGCGTGGAGATCAGCCAGGCTGACGTCGACGCCGAGGTGGCCAAGATCAAGAAGCAATTCCCGACTGAGGAAGACTTCAACAAGCAACTCGCCCAGGTTGGCCAGTCGCCGGAAAAGGTGAACGAGACGATCAAGAAAATGCTGCAGCAGCAGCGCTGGGTCGAGAGCCAGGTCGCCGACAAGGTCGCCGTGACCCCGGAAGATGCCCAGAAGTTCTACAACGACAACAAGCAGGAGTTTAAGGAAGACGCCTCCGTGCGTGCCAGCCACATCCTTATCCGTGTCGATGAAAATGCTCCCGAAGATGTCGTGAAGCAGAAGCAGGCCGAGGCTGCCAAGGTCGCCGCTCTCGCCTCGAAGAAGGGCGCTGATTTCGCCGCCCTCGCCAAGCAGTATTCCGAAGAGCCCGGCGCCAAGGATTCCGGTGGTGATCTCGATTTCTTCACCAAAGACCGCATGGTTCCGGAGTTTGCCGAAGCCGCCTTCAGCCAGAAGGTCGGTCAGGTGAGTCAGCCCGTGCGTACGCAATTCGGCTGGCACGTTATCAAGGTGACCGATACCAAGCCGGCTCGAGTGCTCTCGTTTGACGAGGTGAAGGGTGACCTGACGAACTATCTCAAGCGCAATAAGCAGCGCGAAGCGGTTCAGAACCTGATCAAGGGACTTCGCGATGGCGCCAAGGTGGAAAACAACCTCCCGCCTGCTCCGGAAGCACCGGCCGCCCCGGCTGATGCAGTTACAGTTCCCACAGTGGATCCAGCCAAGGCCCCCGGAGGCATCAATCCGTAA
PROTEIN sequence
Length: 403
MPNKLNSISMKKSLSLVLCTATAAAATLAMTSCKPSQPAASEPAAAPSASPVAAAASPAPAASATPADASAPASPLGLKDPVAVVNGEPISLKELQEAFETAVKSSGVDAASLTDAQKIEGYHQLLDELIVDKLIAKQAASVEISQADVDAEVAKIKKQFPTEEDFNKQLAQVGQSPEKVNETIKKMLQQQRWVESQVADKVAVTPEDAQKFYNDNKQEFKEDASVRASHILIRVDENAPEDVVKQKQAEAAKVAALASKKGADFAALAKQYSEEPGAKDSGGDLDFFTKDRMVPEFAEAAFSQKVGQVSQPVRTQFGWHVIKVTDTKPARVLSFDEVKGDLTNYLKRNKQREAVQNLIKGLRDGAKVENNLPPAPEAPAAPADAVTVPTVDPAKAPGGINP*