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berkeley_reactor_200306_planktonic_scaffold_136582_27

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(29416..30165)

Top 3 Functional Annotations

Value Algorithm Source
alpha-dehydro-beta-deoxy-D-glucarate aldolase n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017446D6 similarity UNIREF
DB: UNIREF100
  • Identity: 51.8
  • Coverage: 245.0
  • Bit_score: 229
  • Evalue 3.20e-57
alpha-dehydro-beta-deoxy-D-glucarate aldolase similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 229.0
  • Bit_score: 201
  • Evalue 2.00e-49
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 235.0
  • Bit_score: 229
  • Evalue 4.50e-57

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Taxonomy

RifOxyA12_full_Lentisphaerae_48_11_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 750
ATGAATACACCGCTCTCATCGCTTATCGCGTCAGACCGATCCGTCCTTGGAACATGGCTCTCTCTCGGCTCGCCGGTCGTCACCGAGCTAGCATCGGAGCATGGGTTCGACTGGCTGCTCCTTGATCTCGAGCATGGATGCTTCACCGAGGCCGCTGTGATGGAAAATCTCAGGGCGATCCGTCTCCCGGGTCCTGCGTCCATCGTGCGGGTGCCATCGCTCGATTCGGCGCTCATCGCCCGGGTGCTCGACCGCGGTGCACAGGGGATCATGGTTCCGCATATTTCCTCACCCGATGAAGCGCGCACACTCGTTGCGGCAACCCGGTATGCGCCTCATGGCGAGCGCGGATACTCACGTACCGTCCGGGCCTATGGATACGGACTGCGCATTCCAGAGGATGCGGCTTCATTCCGCTGTACCGTGATGGCTCAAATCGAAAATCTGGCCGGAGTGAACTGTGTCGAGGAAATCGCCGCGGTGAATGGCGTGGACGTGCTCTTCGTCGGCCCGGCCGATCTCACGCACGACCTAACCGTCCGGGAATCAGCCAATCGCTACGAGGAATGCCTGCTCCGGGTCGCACGCGCAGCGAAGGAGCATGGAAAAGCTGCTGGCATCCTCGCGCGTAATGCCAAGGACCTTCCCCATCTCAAGGAACTCGGCTATCGCGTCTTTGCCCTGGACTCAGACATCGGGTTGTTGCGCAAGGGCTACGAGGTTACACTACAAGCACGGAACCTGCTCTAG
PROTEIN sequence
Length: 250
MNTPLSSLIASDRSVLGTWLSLGSPVVTELASEHGFDWLLLDLEHGCFTEAAVMENLRAIRLPGPASIVRVPSLDSALIARVLDRGAQGIMVPHISSPDEARTLVAATRYAPHGERGYSRTVRAYGYGLRIPEDAASFRCTVMAQIENLAGVNCVEEIAAVNGVDVLFVGPADLTHDLTVRESANRYEECLLRVARAAKEHGKAAGILARNAKDLPHLKELGYRVFALDSDIGLLRKGYEVTLQARNLL*