ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_136582_29

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(31253..32218)

Top 3 Functional Annotations

Value Algorithm Source
bile acid transporter family protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017446D4 similarity UNIREF
DB: UNIREF100
  • Identity: 66.6
  • Coverage: 308.0
  • Bit_score: 420
  • Evalue 1.30e-114
bile acid:sodium symporter similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 306.0
  • Bit_score: 308
  • Evalue 2.00e-81
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 320.0
  • Bit_score: 396
  • Evalue 2.10e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RifOxyA12_full_Lentisphaerae_48_11_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 966
ATGAAAAAACTCCTCGATTCCTTCGCCAATCTCTATCCGGTTTGGATTATATCGGCATCGCTTGCCGGCCTGCTTAAGCCCGAGCTTCTTTCCTGGTTCTCCGGGCAATACATGGTCTGGGCTCTCAGCGTTGTCATGCTGGGCATGGGCTTCACGCTCACGATTGAGGATTTCAAGCGACTTTTTAAAATGCCAGGCTGTCTCGCGCTCGGCTTTTTTGCGCATTATACGATCATGCCTCTGACGGGTTGGGCGGTTGCCCATCTTCTCAGGCTTCCCCCGGGCTTCACTGTCGGCTTGATCCTCGTCGCCAGCTGTCCGTCCGGTACGGCCTCCAATGTCATCAGTTACCTCTCCCGAGCCAACGTCGCACTCGCGGTGATGGTCACACTTACTTCAACGCTGCTAGCTTTCATCGCCACGCCTCTTTGGTGCCAGGCCCTCGCTGGTCAATATGTGCCGGTCGATGCCTGGGGCCTGGCTCGCACGACTTTTCAGGCCGTGGTGGCACCTGTGCTCATCGGCGTCCTGCTGAATTGGAAATGTCCCCGGGCGGTGGCATCGGTTTCGCAGTACGGTCCTTTTGTATCGGTCACGGCTCTCATTTTTATCGCGGGGAGCATCGTTGCGCAAAGCGCCGACGCCGTGATTGCGAATGCCGGCAAGCTGGCATTGGCGGCCGTGCTTCTACACATGGTGGGCTTCGTCGTCGGCTATTCTCTCTCCCGGCTTTTCCGGTTCAATGAGCAGATTTCCCGCACGATTGCCATCGAGGTCGGCATGCAAAACGGCGGCATGGCGGCCGTATTGGCCAAGCGAAATTTCCCTTCCGATCCCATGGTTGCCGTACCTGCTGTGTTCAGCAGTGTCATGCAAACCATCATCGGCAGCCTGTTTGCCTCCTACTGGCGGAGACGGCCGATTGAGGTGGAGCCCGAGACCATTGCCACACGCGCCGGACACTAA
PROTEIN sequence
Length: 322
MKKLLDSFANLYPVWIISASLAGLLKPELLSWFSGQYMVWALSVVMLGMGFTLTIEDFKRLFKMPGCLALGFFAHYTIMPLTGWAVAHLLRLPPGFTVGLILVASCPSGTASNVISYLSRANVALAVMVTLTSTLLAFIATPLWCQALAGQYVPVDAWGLARTTFQAVVAPVLIGVLLNWKCPRAVASVSQYGPFVSVTALIFIAGSIVAQSADAVIANAGKLALAAVLLHMVGFVVGYSLSRLFRFNEQISRTIAIEVGMQNGGMAAVLAKRNFPSDPMVAVPAVFSSVMQTIIGSLFASYWRRRPIEVEPETIATRAGH*