ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_151594_16

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(23732..25681)

Top 3 Functional Annotations

Value Algorithm Source
Na+/solute symporter n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IVH2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 672.0
  • Bit_score: 778
  • Evalue 2.80e-222
sodium:proline symporter similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 672.0
  • Bit_score: 778
  • Evalue 8.00e-223
Sodium:proline symporter {ECO:0000313|EMBL:AHF91564.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 672.0
  • Bit_score: 778
  • Evalue 4.00e-222

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Opitutaceae bacterium TAV5 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1950
GTGGGAGTCACGGACTGGCTGCTCATCTCCATCCCGCTTTTGGGATTGGTGGTCGTCGCTCTGTCCACGCGTCGCTATTTGCGAGGAGTGGCCGACTTCCTCTCTGGCGGGCGGATGGCGGGCAGGTATCTCCTCGCTGTGGCGAAAGGGGAGCAGGGCGTGGGTGCCGTGGTGTTCGTCGCGACTTTCGAAGTAATTTCGAAGTCGGGTTTCGTGCTGACGTGGTGGGGATGGTTGAGCGTGCCGGTGACGCTTATCGTGGCGATCAGCGGATGGGTGATTTATCGCTTCCGCGAAACTCGCGCGCTCACGTTGGCGCAGTTCTTTGAGATTCGCTACAGCAAGAGGTTTCGCATCTTCACTGGTTTCCTCGGCTTTGCCGCAGGTATTGCCAATTTCGGCATCATCCCCGTCGTCGGGGCGCGGTTCATGACGTATTTTCTGGGCTTGCCGCCCACGGTGCACCTCTTTGGCTGGGAGGTGGCGACCTACATTCCGCTGATGGCTTTGCTCCTAGCGATCAGCCTAGCCCTCACGCTATCGGGCGGACTGATCACGCTTATGGTGACCAACTGCCTGGAGGGGATGGTCTCGATGGTGCTCTTTCTCATCATCATCGCCTTTCTCTTCACGATGTTCAGCTGGTCGGAGATTTCGACCGTGCTGGAAAACCGGCCCGCTGGCGAATCGCTGCTCAACCCCTTTGATTCCATGGGGCTGAAGGATTTCAACATCTGGTATGTGCTGATGGGTTTGTTTGGCGCGGTCTACCGCACCATGGCCTGGCAAAACCAGGGAGCATACACCACGGCAGCAGTGACTCCGCATGAGTCCCGCATGGGCGGTGTGATGGCCAACTGGAAGGGACTAGGCAATTCCGCCATCATTACGCTGCTCGCCGTCTGCGCGATGACCTATCTGGCGCATCCTGATTTCACGGCGCAGGCGGCCGCAGTGAAGCAGCAGGTGGCCGAGATCGGCCAGCCCCAGCTTCAGGAGCAGATGACGATCCCCATCGCCGTCGTGCACATGCTGCCCGAGGGGATCAAGGGGCTGCTCTGCATCATCCTGCTCATGGGGATCTTCGGCGGCGATGGCACGCACCTGCTTTCCTGGGGCAGTCTGTTCATTCAGGATGTCATCCTGCCCCTGCGCAAAAAGCCCTTCACGCCAAAACAGCACATCCGGCTCCTGCGCCTCTCGATGGTGGGCGTGGCGGTGTTCGCGTTTTGCTTCGGATGTCTCTTCAAGCAAACGGAGTACGTCATGATGTGGTGGGCCGTGACCGAGGCGATCTACGTCGGCGGCGCGGGCGTGGCGATCATCGGCGGACTTTATTGGAAAAAGGGAACCACCGCAGGAGCCTGGGCCGGGCTGCTGACTGGGTCCGGCCTGGTAACGGGCGGTATCATAGCCCGGCAGATCTGGGGGGACGCCTTTCCGATCAATGGAGCACAGATCGGCTTCTTCGGCGCGATCTCAGCCTGCGTCGTCTATGCCGTGGTCTCGCTGCTGACCTGCCGGAAGGACTATGACATGGACCGCATGCTGCATCGCGGGAAGTATGCCGTGAAAGCCGAGCAAGCCTACGAAACGGTGTCCACCAAGCGCGTCACCTGGGGCCGGCTGATCGGGTTCGACGAGCATTTCACCCTCGGCGACAAGCTCCTGGCCGGAGGCCTTTTCGGCTGGAGCATACTGTGGTTTGGCGTGCTCGTCATCGGGTCGATCTGGAACCTTATTGCCCCGTGGCCCATCGCAGTGTGGTCGCACTTCTGGTTCGTCGTTGGCATCGGCATCCCGGTCTTCTTCGCAGTCGTAACCGCAATCTGGTTCACATGGGGAGGCATCCGAGACATGCGGCTCTTTTTCTCCCGCCTTCGCCAGGAACGCCCCGATGCCGAAGACAATGGAATGGTGGTCACTCACCACAAACTCAACGAGCCCTGA
PROTEIN sequence
Length: 650
VGVTDWLLISIPLLGLVVVALSTRRYLRGVADFLSGGRMAGRYLLAVAKGEQGVGAVVFVATFEVISKSGFVLTWWGWLSVPVTLIVAISGWVIYRFRETRALTLAQFFEIRYSKRFRIFTGFLGFAAGIANFGIIPVVGARFMTYFLGLPPTVHLFGWEVATYIPLMALLLAISLALTLSGGLITLMVTNCLEGMVSMVLFLIIIAFLFTMFSWSEISTVLENRPAGESLLNPFDSMGLKDFNIWYVLMGLFGAVYRTMAWQNQGAYTTAAVTPHESRMGGVMANWKGLGNSAIITLLAVCAMTYLAHPDFTAQAAAVKQQVAEIGQPQLQEQMTIPIAVVHMLPEGIKGLLCIILLMGIFGGDGTHLLSWGSLFIQDVILPLRKKPFTPKQHIRLLRLSMVGVAVFAFCFGCLFKQTEYVMMWWAVTEAIYVGGAGVAIIGGLYWKKGTTAGAWAGLLTGSGLVTGGIIARQIWGDAFPINGAQIGFFGAISACVVYAVVSLLTCRKDYDMDRMLHRGKYAVKAEQAYETVSTKRVTWGRLIGFDEHFTLGDKLLAGGLFGWSILWFGVLVIGSIWNLIAPWPIAVWSHFWFVVGIGIPVFFAVVTAIWFTWGGIRDMRLFFSRLRQERPDAEDNGMVVTHHKLNEP*