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berkeley_reactor_200306_planktonic_scaffold_151594_95

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 106890..107237

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XM76_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 99.0
  • Bit_score: 148
  • Evalue 3.30e-33
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EEF59069.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 99.0
  • Bit_score: 148
  • Evalue 4.70e-33
cinnamoyl ester hydrolase similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 104.0
  • Bit_score: 121
  • Evalue 9.40e-26

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 348
ATGAACTACATCGATTGCCCGGTCACCCGCACTTTAAGTGTGATGGGAGGCCGATGGAAACCTGTTCTGCTCCATTACCTGATGGAGAAGCCGAGGCGAGCGGGCGAACTGACACGCCTGATCCCGCAGGCCAGCGCGAAAGTGCTCACCCAGCAACTCCGGGAACTCGAAAACGACAACATCGTCCATCGCGAAGTGTTCCCCCAGATTCCGCCTAAGGTGGAATATTCGCTGACCGACTTCGGAGAATCCCTCCGCCCCGTCATGGACGCGCTCTGCGAATGGGGAAGGACCAACGCGTCCCACACAAATGATACCCAAGAACTTCAAGAACGAAGCTCCAGATAG
PROTEIN sequence
Length: 116
MNYIDCPVTRTLSVMGGRWKPVLLHYLMEKPRRAGELTRLIPQASAKVLTQQLRELENDNIVHREVFPQIPPKVEYSLTDFGESLRPVMDALCEWGRTNASHTNDTQELQERSSR*