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berkeley_reactor_200306_planktonic_scaffold_151594_115

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(127440..128216)

Top 3 Functional Annotations

Value Algorithm Source
Phenazine biosynthesis protein PhzF like protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=L9K141_9DELT id=5223714 bin=16ft_combo_ws3_JS1 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 259.0
  • Bit_score: 302
  • Evalue 3.10e-79
phenazine biosynthesis protein PhzF family similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 259.0
  • Bit_score: 272
  • Evalue 7.40e-71
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 259.0
  • Bit_score: 300
  • Evalue 1.30e-78

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 777
GTGAAGGTTCCTTATTTCCACGTGGATGCGTTTGCTTCGGAGATGTTCCGGGGGAACCCGGCGGGTGTGTGTTTGCTACGTGAGACGACCGATGACGCGACGTTGCAGCGAATCGCATTTGAAAACAACCTTTCGGAAACTGCCTTTGTGCTGCCGCATGGGGAGGAGTTTTCCATTCGCTGGTTCACGCCGACGGTGGAGGTGGACCTGTGCGGCCATGCCACGCTGGCGGCAGCGCATGTGCTGGTGACTGAGGCTCGTTGCCATGCACCACTTCGTTTTGATTCGGCAAGCGGCATACTCGGCGTGTCGGCGGAAGGGGATCGACTCGTGCTGGATTTCCCGGCACGGCCAGGAAAACACGTTGCGGCCACGAGGACGCTGACCGAGGCGCTGGGAGCCGATCCATGCGAGGTTCACAAGGCAGAGGATTTTCTCTGCGTTTACGATCGGGCGGAGGACATCCTGTCCTTGAGTCCGGACATGGCTGCGATAGCCGCGCTGGATGCCCGCGGGGTGATCGTGACTGCGCCGGGGCACGACTGCGACTTTGTCTCGCGCTTCTTTGCTCCGGGGTGCGGCATCCCCGAGGACCCGGTGACGGGATCGGCTCATTGTACGCTTGCGCCGTATTGGGCCGAGCGGCTGGGGAAAACCACATTTTTTGCGAGGCAGGTCTCCTCTCGTGGGGGCGAGCTGTGGTGCGAACTGGTCGATGACCGGGTGCGGATCGGAGGACGGTGTGTCACTTATTTGCGCGGAGAGATTGTGATTTGA
PROTEIN sequence
Length: 259
VKVPYFHVDAFASEMFRGNPAGVCLLRETTDDATLQRIAFENNLSETAFVLPHGEEFSIRWFTPTVEVDLCGHATLAAAHVLVTEARCHAPLRFDSASGILGVSAEGDRLVLDFPARPGKHVAATRTLTEALGADPCEVHKAEDFLCVYDRAEDILSLSPDMAAIAALDARGVIVTAPGHDCDFVSRFFAPGCGIPEDPVTGSAHCTLAPYWAERLGKTTFFARQVSSRGGELWCELVDDRVRIGGRCVTYLRGEIVI*