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berkeley_reactor_200306_planktonic_scaffold_151594_118

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 130501..131025

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6CCA4 similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 174.0
  • Bit_score: 223
  • Evalue 1.60e-55
Variovorax paradoxus strain MEDvA23 contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31499.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 175.0
  • Bit_score: 216
  • Evalue 2.70e-53
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 174.0
  • Bit_score: 208
  • Evalue 8.90e-52

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGGAAACCGAAACTCTGTCCGAATCGAGCTACACCGCCGTCATCAATGCCCCCATCGAAAAAGTCAACCTCGCGGACTGGCTCTTCAGCCTGCCGGATGCCGAGTATCAGCGCTGCTCGCCTGCCCATATCGCGGCGGGAACTTCGCGTACTGAAGAAGGCAAGCGCATGTCGCTCAATGTCGAGTGCATAGGCGGCAGCATAGTTGTGCAGCATTATGTCGAGGACATCGCCGAGCCGCACCATTGCCGCGTGATCTCACTTTCCGATGTATTTTCGCCAAACGGTCGTACCAAGGTAAAGGTCACGTGGGAGCTGTCGGTTAAGAAAATCGATGCGGAAACATGCGAGTTCACAAATCATGTCCATGGAGACGCCACGCCGGAGTTCCATGCCTTCCTGGATTCACATGGTCTGCCTTATGAGTCCGCCCAGCAGGCTCGCCAGCTCGCTTCGTCCGCGCACAATCGCATCGAAACGCCACTGTTCGCGAAGAGCATCGAGAATCACGCCCTCCGACGCTGA
PROTEIN sequence
Length: 175
METETLSESSYTAVINAPIEKVNLADWLFSLPDAEYQRCSPAHIAAGTSRTEEGKRMSLNVECIGGSIVVQHYVEDIAEPHHCRVISLSDVFSPNGRTKVKVTWELSVKKIDAETCEFTNHVHGDATPEFHAFLDSHGLPYESAQQARQLASSAHNRIETPLFAKSIENHALRR*