ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_151594_181

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 192191..193066

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI000380198D similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 277.0
  • Bit_score: 203
  • Evalue 2.20e-49
pheA; Prephenate dehydratase similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 294.0
  • Bit_score: 201
  • Evalue 2.40e-49
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 276.0
  • Bit_score: 224
  • Evalue 1.30e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RifOxyA12_full_Lentisphaerae_48_11_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 876
ATGCAAACTCGCCACTTGTCAGGCAGCCTGATCAGCCGGAAAAAGAGAGGAATGCCGGAGATTTACTACCTGGGCCCAGAAGGAACCTTCTCTCACATCCTTGCCCGGAAGCGATTTGGCCGCCGCGCCAACCTGGTCGCCTGCCCTGCCATTGAGGCCATTTACGATCGTGTGCGCGAAAATCCCTCCGGCCTCGGCCTCGTACCGGTGGAGAACTCCAGCGGCGGGACTGTTTACGATTCCGTCGACGCCATGATCCGCAATGCCGGAAAGATCTTCCTCCGCGAAGAGCTCTCCCTCGACGTCCGTATCGCCCTCCTCGGCCACGCCGGGCAGGAGGTGACGACCATCTACTCGCACTTCATCCAGCTCAAGCATCACGCGGAATGGCTGAAACAGCGTTATCCCAAGGCTCGCCAGCGAGCCGTCGCCAGTACCGCCATCGCGGCACAGAAGGCGAAGGCGTCGCCCCACGCGGCGGCTCTCGCCTCGCCGGGAGCCGCAGAGGTCTACGGCCTCGACGTCTTGGAGAAATCCCACGCCGGCAGCGTAAATGTAACCCACTTTGCGATCATCGGCGCATCACCCGCCCCAGAAGTCGACGAGGTGCGCAAGACTGCCCTCATCGCCGCCTTGCCCAACTCCTGCGGCAGCCTCCATCAATTCCTTGGTCCCTTCGCCCGTCTGGGCGTGAGCCTCACTCGCATCGTTTCGCGACCGGTGCCGGGAAAACCCCAGACGTACGTCTTCTTTGTCGAGATCGAAGGCGGCGAGCACGATCCCGCTGCCGCCAAGGCGCTGGCCCGCGCACGCAAACTTTCCGAGTCGCTCGTAAGCCTTGGAACGTTCCCCGTGCGAGGGCGTTTCAAATCGTAA
PROTEIN sequence
Length: 292
MQTRHLSGSLISRKKRGMPEIYYLGPEGTFSHILARKRFGRRANLVACPAIEAIYDRVRENPSGLGLVPVENSSGGTVYDSVDAMIRNAGKIFLREELSLDVRIALLGHAGQEVTTIYSHFIQLKHHAEWLKQRYPKARQRAVASTAIAAQKAKASPHAAALASPGAAEVYGLDVLEKSHAGSVNVTHFAIIGASPAPEVDEVRKTALIAALPNSCGSLHQFLGPFARLGVSLTRIVSRPVPGKPQTYVFFVEIEGGEHDPAAAKALARARKLSESLVSLGTFPVRGRFKS*