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berkeley_reactor_200306_planktonic_scaffold_151594_236

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 237994..240174

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746019 similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 736.0
  • Bit_score: 606
  • Evalue 2.80e-170
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:EEF58426.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.0
  • Coverage: 606.0
  • Bit_score: 341
  • Evalue 2.40e-90
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 423.0
  • Bit_score: 287
  • Evalue 1.10e-74

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2181
ATGCCGTCGGAAAATCCCCCCTCTTCCGCCCACTCTGCGCCGACTGGGGAGGATTATCACACCGCCGATTTGCGGGAGCTGAACCGTCAGTTGATGGACAGCGAGCAGCGGCTGCGGCTGGCGCTTGAGACCGGCCGCATCGGACTGTGGGTGTGGAATTCCTCCGACGTGGCCAACGCCGGAGACTGGTCGCCGCGACTGCGAGAGATCTTCGGCATCCCGCTCACGGCCGAGGTGACGCATGATGTGTTTTTGAACTGCGTGCATCCCGATGATCGCGAGAAAGTCGATGCCGCCGTGATGAACGCCCTCGCGGGAGCCAATGATGGCGAGTACCGCATGGAGTACCGCTCGATCCACCCTCGGGATGGCTCCCTGCACTGGGTCACCGCACATGGTCAGGCTTTTTTTGACGCCCAGAAGCGCCCGATCCGTTTCATCGGCACGGTGATGGACATCACCGACCGCAAGGAGGCTGAAGTCGAGCTATCCGGTCTCAACCGCGAGCTGGAGTCGCGCATCGCGGAGCGAACCCGCGAGCTGGAGCTCGCGAATGCCGCTTTGCTACGGAGTGAGGATCGGCTGCGACGGGTCATCGACACGATCCCTGGACTCGTCTTCACCAGTTCGCCGGAGGGCTCTTTTGATTACCTGAACAATCGCTGGCTCGACTACACCGGCATGTCGCTCGAGGACTCCACCGGCTGGGGCTGGCAGGTCGCCATCCACCCAGACGACCTTCCCGGCCTGACGCGATACTGGAAAGCACTGCTCCAGGCCGGAGTACCGGGAAAATACGAGTCTCGCATGCGCGGAGCCGACGGCCAGTATCGCTGGTTCCTTTCCCGCGCGGTTCCCTATCGGAACGAAACGGGCGAGATCGTCAAATGGTATGGCACCAAGGTGGATATCGAGGGGCACCGCGCCTCGATGCGCCTCCTTCGCAGCCAGTTCGACGCGATCACGGATCTGCTGGATTCGCTCTCGACGGAAGGGGATTCGGAAAAACTCGTCGAGCACGTCGCCCGAGTCATCCGGGACCAGACCTCGGCGGACGTACTGACCTTTTGGATTCGTAACGATGCCGGTGTGATCGACCGAATGGGCACGTTCAGCAACAACCGCCTTCAGTTTCCCGCGGAGTCCGCCTCGGCGGACCAGATCGCCGCACTCCGTGCATTGGGACATCCCGTATGGAACCGCTTTTTTGAAACCTGCGTCGATTGCGTCGAACTCGACTTCTCCAGTGATCCTCCCATGGTACGGATCGCGGGAGGCCAGGGTACAAACTGGATGCCCGCGCTCGGGTGTCCGCCGACCCCGGCCATCCTGGAGAATTATCTCCGAAAGGTAAAAGACTCCGGCACCCTGACCGCCGTGACGGTGCCCATGCCGATCAGCGGAAGCTTCGGCGGCATGGTCAGCGCACGGTTCCGCACGCACCGCACCTTCCGCGATGAAGAACTCGAGCTCCTGAAGGCGCTCGCCCAGCAGGCCATGCTCACGATCGAGATGATGCGACTGGCTCGTATCGGTCGGCAGTCTGCCGTCATCTCCGAGCGCAACCGACTCGCGCGCGAGATCCACGATACGCTCGCTCAAGGATTGACGGGCGTCATTGTTCAACTGGAAGCCGCCGAGGACGCCCGTTCGCAAGACCTGGATGCGGAAGCCGGCGCCCACATTGCCCGCGCCCGGGAGCTGGCGGCGGAAAGCCTCAAGGAAGCGCGTCGCTCCGTCCATGCCATCCGTCCCGAGGCTCTCAGCCGGATGGATCTCTGCGCGGCCCTGGCCGACCTCATCGAAAAGGCCACATCGCGAACCTCGGTACGCGGTTCCGTATCCGTGGAAGGCGACTCCCGCCCCCTCCCCAAAAGCTGGGAGGACAATCTCCTCCGCATCACCCAGGAGGCACTCACCAATGTCCTGCGCCATTCGCGAGCCACCGAGTTTCACGCGAAACTCGCCTTCGCCAGCGATTCACTGCAACTCGCACTCTCCGACAACGGCTGTGGCTTCCCTCTGGACCAGAAACCGGTAGGGTTTGGATTGCGCGGAATGCACGAACGGGTCGAGGCGATGGGCGGCACATTGACCATCAAAAGCCATCCCGACACGGGCACCCGCATCGCTGTCGTCCTCACACTTCCTTCTCCCACTGATGAAAACCGAATCGCCTGA
PROTEIN sequence
Length: 727
MPSENPPSSAHSAPTGEDYHTADLRELNRQLMDSEQRLRLALETGRIGLWVWNSSDVANAGDWSPRLREIFGIPLTAEVTHDVFLNCVHPDDREKVDAAVMNALAGANDGEYRMEYRSIHPRDGSLHWVTAHGQAFFDAQKRPIRFIGTVMDITDRKEAEVELSGLNRELESRIAERTRELELANAALLRSEDRLRRVIDTIPGLVFTSSPEGSFDYLNNRWLDYTGMSLEDSTGWGWQVAIHPDDLPGLTRYWKALLQAGVPGKYESRMRGADGQYRWFLSRAVPYRNETGEIVKWYGTKVDIEGHRASMRLLRSQFDAITDLLDSLSTEGDSEKLVEHVARVIRDQTSADVLTFWIRNDAGVIDRMGTFSNNRLQFPAESASADQIAALRALGHPVWNRFFETCVDCVELDFSSDPPMVRIAGGQGTNWMPALGCPPTPAILENYLRKVKDSGTLTAVTVPMPISGSFGGMVSARFRTHRTFRDEELELLKALAQQAMLTIEMMRLARIGRQSAVISERNRLAREIHDTLAQGLTGVIVQLEAAEDARSQDLDAEAGAHIARARELAAESLKEARRSVHAIRPEALSRMDLCAALADLIEKATSRTSVRGSVSVEGDSRPLPKSWEDNLLRITQEALTNVLRHSRATEFHAKLAFASDSLQLALSDNGCGFPLDQKPVGFGLRGMHERVEAMGGTLTIKSHPDTGTRIAVVLTLPSPTDENRIA*