ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_202757_31

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 39667..40629

Top 3 Functional Annotations

Value Algorithm Source
dihydrodipicolinate synthase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744E3A similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 309.0
  • Bit_score: 415
  • Evalue 3.10e-113
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:EDY18369.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 298.0
  • Bit_score: 411
  • Evalue 1.10e-111
dihydrodipicolinate synthase similarity KEGG
DB: KEGG
  • Identity: 55.8
  • Coverage: 303.0
  • Bit_score: 348
  • Evalue 1.30e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 963
ATGGCTCTTCCGCATTTTCAAGGCATCTTTCCCCCCCTCGTCACCCCGCTCTCCTCACCGGACAAACTCGATGTTGCGGGTTTGGAGCGATTGATCGAGCACGTTCTTTCCGGCGGCGTACACGGGCTCTTCATTCTCGGAACGACCGGCGAGGCGCCCAGCCTGGACCATAATCTCCGCAAGGAACTGATCCAGCGCACCTGCCGTCAGGTGCGGGACCGCGTGCCGGTATTGGTCGGCATCACCGACACGGCGATCGTCGAGGCCAAGGAGATGTCGCGCCTCGCGGCGAACTACGGAGCCTCCGCCGTGGTGCTCGCCCCTCCCTACTATTTTCCGAACAGCCAGACCGAACTGGTCGAGTACATCGAGCGTCTCGCTCCGGCGCTGCCCCTGCCTCTGGTGCTCTACAACATGCCGACGCACACGAAGACGATGTTTGAGCTCGACAGCCTGCAGCGGCTGATGGAGGTGGAAAACATCATCGGCTTCAAGGACAGCTCGGGAAATATGCTGTATTACCATCAGGTGCTTTCCTCGCTCTCCATCCGTCCGGACTGGTCCGTGCTGATGGGACCCGAGGAACTGCTGGGCGAGGCGGTGCTCTTTGGCGGGCATGGTGGCGTCTGCGGTGGGGCAAATCTCTGCCCGCAGCTCTACGTCGACCTGTACGAGGCGGCGAGATGGCGCAATATCGAGCGCGTCCTCGACCTGCACCATCGCGTGATGCGTATTTCCTCTACCATCTATCGCGTAGGCAAGTACGGCTCCTCCTTCATCAAGGGGCTCAAGTGCAGCCTGAGCCTGCTCGGCATCTGCGACGACTTCATGTCGGAGCCGTTTCATCGTTTCTACGACGTCGACCGGGCGAGGTTGCATGAACTGCTCGAGGAGCTGGGTGTGACGGTTTCCAACCCCTATCCCGCCTCCGACGATCCCGTTATGACGAGCCTGATGCGCTAG
PROTEIN sequence
Length: 321
MALPHFQGIFPPLVTPLSSPDKLDVAGLERLIEHVLSGGVHGLFILGTTGEAPSLDHNLRKELIQRTCRQVRDRVPVLVGITDTAIVEAKEMSRLAANYGASAVVLAPPYYFPNSQTELVEYIERLAPALPLPLVLYNMPTHTKTMFELDSLQRLMEVENIIGFKDSSGNMLYYHQVLSSLSIRPDWSVLMGPEELLGEAVLFGGHGGVCGGANLCPQLYVDLYEAARWRNIERVLDLHHRVMRISSTIYRVGKYGSSFIKGLKCSLSLLGICDDFMSEPFHRFYDVDRARLHELLEELGVTVSNPYPASDDPVMTSLMR*