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berkeley_reactor_200306_planktonic_scaffold_333344_8

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 8531..9220

Top 3 Functional Annotations

Value Algorithm Source
phosphoglycolate phosphatase n=1 Tax=Rhizobium loti RepID=UPI00037E9FDA similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 221.0
  • Bit_score: 231
  • Evalue 7.70e-58
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:ETA71462.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 221.0
  • Bit_score: 231
  • Evalue 8.30e-58
HAD-superfamily hydrolase similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 230.0
  • Bit_score: 226
  • Evalue 7.10e-57

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGAAATATCGCGTGTTTGCCACGGATTTTGATGGAACGATCGCCACGGATGGCATGTTGGACGGTCCCACTATTGGGGCATTGCAGCGATTGCGTAGCGCGGGCGTGATCTGCTGTCTGGTTACCGGGCGTGAGTTGTGGGACTTTGAGAACGCGGAAGCCGTCCTTTCACTATTCGACTATGTCGTGGCCGAGAACGGAGCGGTGCTCTACACCCCCGGGACGAAGGACACGCGTGTGATTGCCCCTGCACCTCCTGCGGATTTTCTGAGCGAGCTGACGCGCCGGGGAGTGCCGATCAGAGTGGGGCAGGTCATCGTGGCGACAGTGGAACCCCATGAAGTCGCAGTGCTGGAGGCTGTAAAGGAGGCGGCTCTGGAACTGCAGGTGATTTTCAACAAGGGAGCGGTGATGGTGCTGCCCGCCGGTGTGAACAAGGCGACAGGGTTGCAGGCAATACTTAATCTCTGTGACATGTCCTTTGCCGACGTGGTGGGAGTGGGCGATGCGGAGAATGACCACGTGTTTCTCGAACATTGCGGGCTGTCAGCGGCTGTAGCCAATGCAGTGCCGGGAATCAAGGAAAGGGCAAAGCTGGTGACGCGTTCGAACGCCGGCGCTGGTGTTACGGAGTTGATCGACGCCTTATTGAGCGAGAATATCCAATCTCTTCAACCGGAGGAAAACTGA
PROTEIN sequence
Length: 230
MKYRVFATDFDGTIATDGMLDGPTIGALQRLRSAGVICCLVTGRELWDFENAEAVLSLFDYVVAENGAVLYTPGTKDTRVIAPAPPADFLSELTRRGVPIRVGQVIVATVEPHEVAVLEAVKEAALELQVIFNKGAVMVLPAGVNKATGLQAILNLCDMSFADVVGVGDAENDHVFLEHCGLSAAVANAVPGIKERAKLVTRSNAGAGVTELIDALLSENIQSLQPEEN*