name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_planktonic_scaffold_333344_1
unknown
|
Not on your lists |
2..217
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_333344_2
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
165..2825
|
Endoglucanase {ECO:0000256|RuleBase:RU361166}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361166};; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
Endo-1,4-beta-xylanase A n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PAV9_9DELT
glycoside hydrolase
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_trna_1
unknown
|
Not on your lists |
2926..3010
|
transferRNA Ser
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_3
unknown
|
Not on your lists |
3272..3427
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_333344_4
unknown
|
Not on your lists |
comp(3612..3758)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_333344_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
4151..4660
|
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2S7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19038.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_6
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
5040..7367
|
endonuclease n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745BC8
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ACB74079.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_7
unknown
|
Not on your lists |
comp(7364..7816)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_333344_8
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8531..9220
|
phosphoglycolate phosphatase n=1 Tax=Rhizobium loti RepID=UPI00037E9FDA
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:ETA71462.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
HAD-superfamily hydrolase
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
9233..9997
|
ROK family protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBT4_9BACT
ROK family protein {ECO:0000313|EMBL:EDY16113.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(10076..10567)
|
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017443C0
Uncharacterized protein {ECO:0000313|EMBL:EDY19052.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
10791..11804
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRS8_9BACT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEF57439.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
short-chain dehydrogenase/reductase SDR
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_12
uncultured bacterium, Bacteria
|
Not on your lists |
11874..13031
|
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000362B51F
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49111.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
adh1; alcohol dehydrogenase
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
13064..13753
|
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IFB6_ANADE
Uncharacterized protein {ECO:0000313|EMBL:CDM66646.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13734..14369
|
Phage SPO1 DNA polymerase-related protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HDH7_ANADF
phage SPO1 DNA polymerase-like protein
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:ABS26773.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_15
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14485..15354
|
3-oxoacyl-ACP reductase n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WZC5_9ALTE
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:ENO16512.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanhaiticus D15-8W.;"
dehydrogenase
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_16
unknown
|
Not on your lists |
15399..15665
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_333344_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
15683..16180
|
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D489_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18690.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_18
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16193..17029
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ21_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62652.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_19
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
17321..18433
|
topA; DNA topoisomerase I (EC:5.99.1.2)
Putative DNA topoisomerase I n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2S9_9BACT
Putative DNA topoisomerase I {ECO:0000313|EMBL:EDY19040.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_20
unknown
|
Not on your lists |
18433..18834
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_333344_21
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria
|
Not on your lists |
18979..19857
|
Putative membrane protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T4R7_9CYAN
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AFY77131.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_22
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
20031..21239
|
beta-glucosidase A (EC:3.2.1.21)
Beta-glucosidase A n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCI2_DICT6
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_23
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
21311..22141
|
Probable DNA repair protein CfE428DRAFT_4308 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5W9_9BACT
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Ku domain-containing protein
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_24
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
22144..23682
|
ligD; ATP-dependent DNA ligase (EC:6.5.1.1)
DNA polymerase LigD, ligase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5X0_9BACT
DNA polymerase LigD, ligase domain protein {ECO:0000313|EMBL:EDY18173.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_25
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
23682..24614
|
DNA polymerase LigD, polymerase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5X1_9BACT
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:EDY18174.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA polymerase LigD polymerase subunit
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_26
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(24634..25347)
|
Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EDY19089.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
two component LuxR family transcriptional regulator
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_27
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25653..26474
|
Blr0772 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89WC0_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL73285.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_333344_28
unknown
|
Not on your lists |
comp(26640..27134)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_333344_29
uncultured Aquifex sp., Aquifex, Aquificales, Aquificae, Aquificae, Bacteria
|
Not on your lists |
comp(27255..28178)
|
Glycosyl transferase family 9 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R5_9BACT
Glyco_transf_9 {ECO:0000313|EMBL:AIA92643.1}; Flags: Fragment;; TaxID=522376 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex; environmental samples.;" source="uncultured Aquifex sp.;"
lipopolysaccharide heptosyltransferase III
|