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berkeley_reactor_200306_planktonic_scaffold_333344_26

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(24634..25347)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 47.4
  • Coverage: 215.0
  • Bit_score: 199
  • Evalue 2.60e-48
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EDY19089.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 215.0
  • Bit_score: 199
  • Evalue 3.60e-48
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 209.0
  • Bit_score: 175
  • Evalue 1.10e-41

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 714
ATGAGTGCTGAAATACGAACACGGTATGGAGTGTTGGTGGTCGATGATCATCCGCTGTTTCGTAAGGGGATCATCAGTATCATTGATGAATCGGAACACTTTGAGGTGATCGGCGATGCCGGGGACGGCAAAGATGGGTTAACCCACATGCGCCAGAAAAACCCGGATCTGATCATTCTCGATATTTCCATGCCCGGCCACAACGGGGTGGAACTTTTGAAAATGATGAAGGCAGAGCGTCCCCATACCCCCATCCTCGTACTGACTGTACACGACGAGGTAATCTACGCGGTGCGAGCCTTGAAAGCTGGTGCACGCGGCTACATCCTGAAGGGAGAACCCGGGGATGAAATCCTGACGGGCATGAGCGCCATCATGCGAGGCGAGTTGTTCCTAAGCCATCAGATCAAGCATCGGATCATCTTTCAGGCCATAGAGGCTCTGGATGCGGGCCAGGATTTCCTCCTTCAGAAGCTGACCCACCGGGAACGAGAGGTCTTCGACCTTCTAGGAGACGGCCTGAATTCCGCCGACATCGCGGGTTGGCTGAAACTCAGCACCAAGACGGTGGATACGCATCGCCTTCACATCAGGGAAAAGCTACTTTGCAAGAACGCAGCCGAGGTCGCTGAATTTGCCGCCCAATGGAAACTCTATTCCGAGCAGGAGGTCACTCCTGACACGAAGAATAGCACTCCTGCTCTGATATCCTAA
PROTEIN sequence
Length: 238
MSAEIRTRYGVLVVDDHPLFRKGIISIIDESEHFEVIGDAGDGKDGLTHMRQKNPDLIILDISMPGHNGVELLKMMKAERPHTPILVLTVHDEVIYAVRALKAGARGYILKGEPGDEILTGMSAIMRGELFLSHQIKHRIIFQAIEALDAGQDFLLQKLTHREREVFDLLGDGLNSADIAGWLKLSTKTVDTHRLHIREKLLCKNAAEVAEFAAQWKLYSEQEVTPDTKNSTPALIS*