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berkeley_reactor_200306_planktonic_scaffold_333344_25

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 23682..24614

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase LigD, polymerase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5X1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 305.0
  • Bit_score: 411
  • Evalue 4.30e-112
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:EDY18174.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 305.0
  • Bit_score: 411
  • Evalue 6.10e-112
DNA polymerase LigD polymerase subunit similarity KEGG
DB: KEGG
  • Identity: 63.4
  • Coverage: 306.0
  • Bit_score: 397
  • Evalue 3.10e-108

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 933
ATGGCAAAGGAAACCACACTCGAGATCGACGGCATTTCGGTCGGCGTAAGCCGCCTGGACAAGGTCTTCTATCCCAAGACCGGTTTTACCAAGGGCGATGTCATAGATTACTATATCCGTGTCTCACCATTTCTGCTCCCGCATCTGAAAGACCGGCCCATCAGCTTGAAACGGTACCCGGATGGGGTGGAGGGGTTTTTCTTCTATGAAAAGAACTGCCCGGATTACCGGCCCAAGTGGATGAAGACCATGAAGGTGGCAAAGTCGGACGGCAGTACCATTAGGTATTGTTCGATGAACAATCTGCCCGCTCTCGTCTGGGCTGTAAATCTTGCCGACCTCGAGCTTCATACCTTTCTTCATCGCTATCCGGCCTTGCATCGCCCGAGTTGTCTGGCGTTCGACCTCGATCCCGGGCCTCCGGCGGGAATCGTCCAGTGCGCCGAGGTCGCGCTTCTTCTTCGTCGGATCTTCCAGCAGCTTGGACTGGAGGCTTTCGCGAAAACATCAGGCTCGAAAGGGATGCAGGTGTATGTCCCGCTCAATACTTCCACGACCTATGGGAAAACAAAGGAGTTTGCCGAGATGATGGCCAAGATGCTGGCGGAGAGATTTCCAGATCAAATCACGGGCATGATGAGCAAGGCCAAGCGGCCCGGAAGGATATTCGTCGACTGGAGTCAAAATGATGAAAAGAAGACCACCGTATGTGTGTACTCCCTCCGGGCAAAGGACCATCCTACCGTTTCCACACCGGTGACATGGAGGGAGGTCGGGTCGAGCGCCAGGAGGAAGACGCCTCTTCAGTTTGAGACGGAGCAAGTCCTCGATCGAGTCGAGAAGCTGGGGGATCTCTTCGCACCTGTTCTTGCTCTCAAGCAAAAGCTTCCTCCGATTGCGCGGCTGCGCGACTGTCTTGCGGAACTCGCGTAA
PROTEIN sequence
Length: 311
MAKETTLEIDGISVGVSRLDKVFYPKTGFTKGDVIDYYIRVSPFLLPHLKDRPISLKRYPDGVEGFFFYEKNCPDYRPKWMKTMKVAKSDGSTIRYCSMNNLPALVWAVNLADLELHTFLHRYPALHRPSCLAFDLDPGPPAGIVQCAEVALLLRRIFQQLGLEAFAKTSGSKGMQVYVPLNTSTTYGKTKEFAEMMAKMLAERFPDQITGMMSKAKRPGRIFVDWSQNDEKKTTVCVYSLRAKDHPTVSTPVTWREVGSSARRKTPLQFETEQVLDRVEKLGDLFAPVLALKQKLPPIARLRDCLAELA*