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berkeley_reactor_200306_planktonic_scaffold_333344_11

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 10791..11804

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRS8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 339.0
  • Bit_score: 286
  • Evalue 3.00e-74
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEF57439.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 339.0
  • Bit_score: 286
  • Evalue 4.20e-74
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 321.0
  • Bit_score: 273
  • Evalue 4.30e-71

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1014
ATGAACAAAAGATGGATTGTTGCCGGGGCCGGGCTGGTTGCTGCGCTAGGCGTAGGAGGGATGATCTCGCGCCGAAAACGGGTGGGGCAGTTTCAAGATCGTGTGGTTGTCATCACTGGAGGGTCTCGTGGCCTCGGTTTGGCTCTCGCTCGGGAGTTCGGAACGCGAGGGGCTCTCGTTGCTCTGATCGCCCGCGATGAGGCGGAGTTGAATCGGGCACGGGCGGACTTGTCTGAAAGAGGGATTCGTTGTGCGATCTATGTTTGTGATCTTGGATCAGCTGATCCGATCAGGGCAACCGTCGAGGCTATCATTTCGGATCACGGAAAGATCGATGCTGTCGTCAATAATGCAGGGACGATGCTGGTAGCTCCATTTGATCTGGCCGATGACCAGGATTTCAAAATTGCGATGGATCTTCATTTTTGGGCGCCATATCACATGATCAAGGCTGCGTTGCCGCATCTGCGGAAATCTCAATATCCCAGGATCGTGAATATTTCATCGATCGGCGGTCATGTTGCCGTGCCGCATATGGCGCCCTATGCCGCCAGCAAGTTTGCCCTCGTAGGGTTTTCGGATGCATTGAGGGCGGAACTTGCTTCCGAAGGCATTCGGGTGACGACTGTAGCCCCTGGGCTGATGCGCACTGGCTCTCATGTAAATGCCTTGTTCAAGGGCGATACCGCAGGCGAGTACGCCTGGTTTGCCACCAGCGCTTCCTTGCCTGCGCTTTCAGTAAGTGCATCGCGGGCGGCCAGGCAGATCGTCGATGCCGCTGCCACAGGGCGGGGGGAGTTGACCGTTGGTTTTGCTGCAAAAAATGCGCGCATCTTTCAGGGGCTCCTGCCTCGGGCTGTCTCAGTATTTACCGCCATCGCCGGCCGCATGCTGCCGCATCCGCCGCGGACTGCTCCTCACGCCTCCGAGACCGGACGGGAAAGCCGGAGCAGCCGCCTGTCCCGGGCTTTTACCTGGTTGGCGGACCGGGCCATTCCGCGCTATAATGAATAG
PROTEIN sequence
Length: 338
MNKRWIVAGAGLVAALGVGGMISRRKRVGQFQDRVVVITGGSRGLGLALAREFGTRGALVALIARDEAELNRARADLSERGIRCAIYVCDLGSADPIRATVEAIISDHGKIDAVVNNAGTMLVAPFDLADDQDFKIAMDLHFWAPYHMIKAALPHLRKSQYPRIVNISSIGGHVAVPHMAPYAASKFALVGFSDALRAELASEGIRVTTVAPGLMRTGSHVNALFKGDTAGEYAWFATSASLPALSVSASRAARQIVDAAATGRGELTVGFAAKNARIFQGLLPRAVSVFTAIAGRMLPHPPRTAPHASETGRESRSSRLSRAFTWLADRAIPRYNE*