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berkeley_reactor_200306_planktonic_scaffold_333344_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 17321..18433

Top 3 Functional Annotations

Value Algorithm Source
topA; DNA topoisomerase I (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 354.0
  • Bit_score: 327
  • Evalue 4.70e-87
Putative DNA topoisomerase I n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2S9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 304.0
  • Bit_score: 340
  • Evalue 1.10e-90
Putative DNA topoisomerase I {ECO:0000313|EMBL:EDY19040.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 304.0
  • Bit_score: 340
  • Evalue 1.60e-90

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1113
ATGATACGCGCCAAAGAAAATGTCGTATCTGTGCTCGATGCGTCCCAGAAGGCCCGGGTGATCTATTGTCTAGAACATCAATCCGGCATTCGAAGGAAAAGGGCTGGCCGGGGATTCTGTTATTTAGCTCCAGGCGGTCGGCGAGTGAGTGCCAAACGCGATCTCATACGCATAGAGTCTCTCCGCATCCCTCCGGCGTGGACCGAGGTTTGGATTTCCGCGGACGCAAACACGCACCTGCAGGCAACCGGAAGGGACAACAGGGGAAGAAAGCAGTATCTTTATCATGCGGAATGGCGATCACACCGAGAGCAGCTAAAGTTTCAAAGGCTCTTGACCTTTGCCCGGTTCCTGCCCGCGTTGCGACGAAAGGCGCGGGCTCATGCGCGGCAGCCGGGAACTGGAAAGCAAAAGGTTCTCGCCGTCGTCTGCAACCTCCTTGAACGAACGCTTATCCGTGTGGGCAACGATGAATATGCCGAGCAAAACGGCTCATATGGACTAACCACGATGCGCAACCGGCATGTGACGGTGCGTGGTCCCTTGGTCCAGTTTTCCTTTCCTGGGAAGAGTGGCAAGCATCATGACATCGCGCTTCACGACCCCGTGCTGGCGCGAGTCGTGGCCGAATGCCGGGACCTGCCAGGACGCGAGCTCTTTGAATACAGCGACTCCTCGGGTGAGATTCGTGATGTCACAGCAACTGATGTAAACAGGTACATTCAGGAGGTTTCAAAGGCGGAGTTCACAGCAAAGGACTTCCGCACATGGCATGGCACGGTTCTCGCCGCAAAGGTGCTCAGGGGGATGCCTCCCTTTCAAAGCGCACGAGAGGCCTGTCGGAACCTGGTCTCCGCGGGACGCCGGGTCGCTGACAAGCTGGGAAATACCCTGGCAGTCTGCCGAAGATCCTACATCCATCCCGGGGTCTTCGAGAGCTATCTCGCCGGGGATTTTTCCGACATTTCGCCGGTCCCGATTTCCGGATTGCGCGAGTCGGAACGTTTTACTTATGCCCTTTTGCAGAAGTGGTACTCGAATCATGCGGCCCGGAGGCGGACGCGCCATTCAAATATCAGTCCACGTCAGCGGCGAAAGTCGAATCACAAGTGA
PROTEIN sequence
Length: 371
MIRAKENVVSVLDASQKARVIYCLEHQSGIRRKRAGRGFCYLAPGGRRVSAKRDLIRIESLRIPPAWTEVWISADANTHLQATGRDNRGRKQYLYHAEWRSHREQLKFQRLLTFARFLPALRRKARAHARQPGTGKQKVLAVVCNLLERTLIRVGNDEYAEQNGSYGLTTMRNRHVTVRGPLVQFSFPGKSGKHHDIALHDPVLARVVAECRDLPGRELFEYSDSSGEIRDVTATDVNRYIQEVSKAEFTAKDFRTWHGTVLAAKVLRGMPPFQSAREACRNLVSAGRRVADKLGNTLAVCRRSYIHPGVFESYLAGDFSDISPVPISGLRESERFTYALLQKWYSNHAARRRTRHSNISPRQRRKSNHK*