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berkeley_reactor_200306_planktonic_scaffold_333344_283

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 313016..314404

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-M04 RepID=UPI00037BC0CD similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 463.0
  • Bit_score: 496
  • Evalue 1.50e-137
deoxyribodipyrimidine photolyase-like protein similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 473.0
  • Bit_score: 490
  • Evalue 5.30e-136
Deoxyribodipyrimidine photolyase-related protein {ECO:0000313|EMBL:CAK23697.1}; TaxID=32051 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain WH7803).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 473.0
  • Bit_score: 490
  • Evalue 2.60e-135

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Taxonomy

Synechococcus sp. WH 7803 → Synechococcus → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1389
ATGGGCACGGATGAGCGGTGGCCCATGCGCATGCATCGGCAGAAGGTGATCCTGCACCGTTCCTCCATGCAAGCTTACGCGAGCAGTCTCGAGAAGCAGGGGAATTTCGTGAATTATCTCGCGTGTCCCTCGGGAGCGGGACGGACGGAGTCTATCCTCGAGTCGGCTTTGCCTGCGCAAACGGTCGGGTTGCACGTCGCCGATCCGGTGGATGAAATCCTATCTCGCCGCCTTCGCCGGATCTGTGAGCGCAAGGGCTGGCGGCTCAACGTGTACGATACGCCTGCGTTTCTCAGCCCGCTATCCTTTCTCGATGAATGCTTCGGTGGTCGACAAAAACCGTTCATGGCCCGCTTTTATCAACGGCAGCGAGTGCGGATGGGGCTGCTGGTCTCGCCCGAGGGGAACCCCCTGGGAGGAAGGTGGTCTTACGATGAGGAAAACCGCAGGCGACTGCCGGCGCACGAGCCTGTGGCTCCGGCTCCATGGCTGTCTCGGAACCGGCTCACTCCTGAGCTTCTGGAAGAGGTTGGGCGCCTTTTTCCAAAGGCCAGTGGCGTCCCGGCACCATTTGTTTATCCCTCGACGCATGACGAGGCTTCTGAATGGCTGGATGAGTTTCTTGAGCGGCGGCTGCTTCGTTTTGGAGACTATGAAGATGCGATTTCGGCGAAATATGCCGTCATCTTTCACTCCTTACTGACGCCAGCGCTGAACATTGGCCTGCTCACCCCCGGGCAAATCGTGGAAAGAACTCTGCTCGTCGCCCAGGCGAAGCGAACGCCGCTCAATTCCCTGGAGGGCTTCATTCGCCAGATTGTCGGCTGGAGGGAGTTCATCCGGGCGATGTACGAGCGCCGGGGAAACGCAATGCGAAGGCAGAACTTCTGGGGGTTCAGCCGGCGTATGCCCAAGGCTTTCTACAATGGGACGACAGGTATCGAACCTGTGGATACCGTGGTCGAGAGACTGCTGAAAACGGGATATTGCCATCACATTGAGCGGCTTATGCTGCTCGGCAATTTCATGCTGCTTTGTCGCATTCATCCGGACGAGGTCTATCGGTGGTTTATGGAGATGTTTGTGGATTCCTACGATTGGGTCATGGTTCCCAATGTCTACGGAATGTCGCAATTCGCTGACGGCGGGGCATTTACCACGAAGCCTTACCTTTCCGGATCAAATTACCTGCTCAAGATGTCCGATTTCCCTCGCGGTCCATGGTGTGCCATCTGGGATGCGCTTTTCTGGACGTTTATCGCCGATTACAAGGACGTCTTTCTCGCAAATCCCAGGATGAACATGATGGCTCGGCTCGTGGAAAAACAGGAGGCGAAGCTCGGTGAGCAGCGCCGGATTGCGGAGCGATTCATTTCCAGTCTGGAGTAG
PROTEIN sequence
Length: 463
MGTDERWPMRMHRQKVILHRSSMQAYASSLEKQGNFVNYLACPSGAGRTESILESALPAQTVGLHVADPVDEILSRRLRRICERKGWRLNVYDTPAFLSPLSFLDECFGGRQKPFMARFYQRQRVRMGLLVSPEGNPLGGRWSYDEENRRRLPAHEPVAPAPWLSRNRLTPELLEEVGRLFPKASGVPAPFVYPSTHDEASEWLDEFLERRLLRFGDYEDAISAKYAVIFHSLLTPALNIGLLTPGQIVERTLLVAQAKRTPLNSLEGFIRQIVGWREFIRAMYERRGNAMRRQNFWGFSRRMPKAFYNGTTGIEPVDTVVERLLKTGYCHHIERLMLLGNFMLLCRIHPDEVYRWFMEMFVDSYDWVMVPNVYGMSQFADGGAFTTKPYLSGSNYLLKMSDFPRGPWCAIWDALFWTFIADYKDVFLANPRMNMMARLVEKQEAKLGEQRRIAERFISSLE*