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berkeley_reactor_200306_planktonic_scaffold_333344_391

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 439263..441284

Top 3 Functional Annotations

Value Algorithm Source
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 665.0
  • Bit_score: 861
  • Evalue 6.30e-247
UvrD/REP helicase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4R3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 665.0
  • Bit_score: 861
  • Evalue 4.50e-247
UvrD/REP helicase similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 670.0
  • Bit_score: 697
  • Evalue 3.20e-198

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2022
GTGGCTCGTCATTATCAACTCGATCCGACCTCGGCTGGCCCAGCCACGGACTTTGCCGCCGAGCTCAATGAGCAGCAACTCGCCGCTGTCACAGCAGCTCCCGGACCATCTCTGGTGATCGCCGGGGCAGGCAGCGGAAAGACCCGTACTCTGACCTACCGGGTGGCGTGGTTGCTGGAACAGGGAACCGCTCCGCGGAATATTCTCCTGCTCACCTTCACCAACAAGGCTGCGCGCGAAATGCTCGAGCGAGTTGGAGCCCTTTCTCAAAGCGCCGCCGAGGGCATCTGGGGCGGGACGTTTCACTCTATCGGCAACCGCATCCTTCGGCGCCATGCGGAGCGCATCGGTTTCCGCCAGGGATTTACGATCATGGACCGGGAAGACCAGGAGGAGATGATCGAGAGCATCGTGGCCCGCGAGGGATTGCGCACGAACGACCGGCGCTTCCCGAAGGGAGAGGTGCTGGCGGATATCTTCAGCTACTCCATCAATACCGGGGCACCCATCTCGCAGGTCATCGCGACCAAGTATCGGTACTTCATGCCGCTCATCGCTCAGATCGAGCGAGTGCAGGTGGCCTACGAAGGCCGCAAACGGGAGGCAAACTCCCTCGACTTCGACGATCTGCTCTCCAAGACCCTGGAACTGCTCCAGATGTGCGAGGATGTCGCCACACAGTACCAGCAGCAGTTTCAGCATATCCTTGTCGACGAATACCAGGACACCAACCGCATCCAGGCGGAACTCGTCGACTGGCTGGGGCGCAAACATGGCAACATCATGGTCGTGGGCGACGACGCGCAGAGCATTTACTCGTGGCGCGGCGCCAATTTTGCCAACATCCTCGACTTCCCCAAGCGCTATCCGACCGCACAGGTATTCAAGATTGAGACCAACTATCGCAGCGTGCCCGAGGTATTGAACGTTGCGAATGCCTCGATCCTGGCCAATGAACGGCAGTTTCCCAAGAATCTCGCACCGGTTCGCACGTCGTATCCGATGCGCCCGGCTCTGGTCCCACTGTCGACCAACAACCAGCAGGCGACCTTCCTTGCGCAGCGCATCCTGGAACTGCACGAGGAGGGCGTGAGGTTGAATGAAATCGCGGTGCTGTATCGGGCGCACTTCCATTCCATGGAGGTGCAGCTTGAGTTTACGCGCAGGGGTATTCCCTTCTCCATCACCAGTGGACTGCGTTTCTTCGAACAGGCTCACGTCAAGGATGTGTCGGCATTCCTGAAGTTCGCCACCAATCCTCGTGACGAAGTTGCCTTTAAGCGCATGGTCAAGCTCCTGCCGGGGGTAGGGGCGAAATCGGCAGAATCCATCTGGAGCCAGACGTCGGATGTCCTCGATGGCGGCACGGAGTTTGGCCGCCTGCATGGGCTCAAGGTGCCGTCGAAGTCCGCGAAAAACTGGGAGCAGCTTGTTCACACGCTTGCCGAGCTTTCTCCGGATGGCAGCATTCTGTCACCCTCGACGATGATCGATAGCGTACTCTTCGCCGTCTACGACGACTACATGAAGAGCAAATTCGCCAATTATGAGGCGAGACGCGAGGATCTCAATACACTGGCGGGTTTTGCCCGGCAGTTCGAGAGCACGGAGGAGTTTCTTTCTCAACTCGCGCTGCTCGGAGCAGTCGAGACCAAGGACGCTCTTGCGGTCGAGAGTGAGAGCGAGAAAGTGACGCTCTCGACCATCCACCAGGCCAAGGGGCTGGAGTGGAAGGTGGTCTTTCTCATCTGGCTCACCGAGGGCATGTTTCCCAGCGCCCGAAGCGCCGAGACCGACGAGGGTATCGAGGAGGAGCGGCGGCTTTTCTACGTTGGCGTCACGCGCTGCTGCGATGAGCTCTATCTGACTTATCCCGACCTGAGGCTCAATGCGGGCTATGGCGAGGCCTTGCAAAGGCCCTCACGGTTTCTGACTGAAATCCCTGAGTCCCTTGTGGAGGGCTGGGAGGTCTCCTCCAGCCGTCAGCCGGAAAATATCCCCGAGGAAGATGCGCCGTTTTAG
PROTEIN sequence
Length: 674
VARHYQLDPTSAGPATDFAAELNEQQLAAVTAAPGPSLVIAGAGSGKTRTLTYRVAWLLEQGTAPRNILLLTFTNKAAREMLERVGALSQSAAEGIWGGTFHSIGNRILRRHAERIGFRQGFTIMDREDQEEMIESIVAREGLRTNDRRFPKGEVLADIFSYSINTGAPISQVIATKYRYFMPLIAQIERVQVAYEGRKREANSLDFDDLLSKTLELLQMCEDVATQYQQQFQHILVDEYQDTNRIQAELVDWLGRKHGNIMVVGDDAQSIYSWRGANFANILDFPKRYPTAQVFKIETNYRSVPEVLNVANASILANERQFPKNLAPVRTSYPMRPALVPLSTNNQQATFLAQRILELHEEGVRLNEIAVLYRAHFHSMEVQLEFTRRGIPFSITSGLRFFEQAHVKDVSAFLKFATNPRDEVAFKRMVKLLPGVGAKSAESIWSQTSDVLDGGTEFGRLHGLKVPSKSAKNWEQLVHTLAELSPDGSILSPSTMIDSVLFAVYDDYMKSKFANYEARREDLNTLAGFARQFESTEEFLSQLALLGAVETKDALAVESESEKVTLSTIHQAKGLEWKVVFLIWLTEGMFPSARSAETDEGIEEERRLFYVGVTRCCDELYLTYPDLRLNAGYGEALQRPSRFLTEIPESLVEGWEVSSSRQPENIPEEDAPF*