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berkeley_reactor_200306_planktonic_scaffold_44586

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Displaying items 31-60 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_44586_29
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30605..31642
DNA (1038bp) protein (346aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E624_9MICO
putative metal ABC transporter ATP-binding protein
berkeley_reactor_200306_planktonic_scaffold_44586_30
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31635..32294
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7D8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85058.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
amino acid transport protein
berkeley_reactor_200306_planktonic_scaffold_44586_31
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32313..33908)
DNA (1596bp) protein (532aa)
TAP domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E626_9MICO
TAP domain protein {ECO:0000313|EMBL:EIC07623.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hydrolase or acyltransferase
berkeley_reactor_200306_planktonic_scaffold_44586_32
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33905..35080)
DNA (1176bp) protein (392aa)
ATPase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E627_9MICO
DNA polymerase III subunit delta {ECO:0000313|EMBL:EXJ52316.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ATPase
berkeley_reactor_200306_planktonic_scaffold_44586_33
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35233..35856)
DNA (624bp) protein (208aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Thymidylate kinase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E628_9MICO
thymidylate kinase
berkeley_reactor_200306_planktonic_scaffold_44586_34
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35853..38564)
DNA (2712bp) protein (904aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
DNA topoisomerase 1 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B8V4_9MICO
topA; topoisomerase IA
berkeley_reactor_200306_planktonic_scaffold_44586_35
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38632..38958)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7D3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85053.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
conserved secreted protein
berkeley_reactor_200306_planktonic_scaffold_44586_36
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38987..39322)
DNA (336bp) protein (112aa)
TadE family protein n=2 Tax=Microbacterium RepID=H8E631_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85052.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_44586_37
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39319..39558)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A961_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85051.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_44586_38
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39633..40526)
DNA (894bp) protein (298aa)
Flp pilus assembly protein TadB n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E633_9MICO
Pilus assembly protein TadB {ECO:0000313|EMBL:KIC60011.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Flp pilus assembly protein TadB
berkeley_reactor_200306_planktonic_scaffold_44586_39
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40523..41521)
DNA (999bp) protein (333aa)
Helicase/secretion neighborhood ATPase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B8U7_9MICO
Helicase/secretion neighborhood ATPase {ECO:0000313|EMBL:EPD85049.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Flp pilus assembly protein, ATPase CpaF
berkeley_reactor_200306_planktonic_scaffold_44586_40
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41968..43941
DNA (1974bp) protein (658aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Acetyl-coenzyme A synthetase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7C9_9MICO
acyl-coenzyme A synthetase/AMP-(fatty) acid ligase
berkeley_reactor_200306_planktonic_scaffold_44586_41
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43925..48670)
DNA (4746bp) protein (1582aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A953_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85046.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
heme transport associated protein
berkeley_reactor_200306_planktonic_scaffold_44586_42
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48791..49258)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEE1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85045.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
berkeley_reactor_200306_planktonic_scaffold_44586_43
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49473..49940)
DNA (468bp) protein (156aa)
Endoribonuclease L-PSP n=2 Tax=Microbacterium RepID=H8E640_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85044.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
translation initiation inhibitor, yjgF family
berkeley_reactor_200306_planktonic_scaffold_44586_44
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49937..50155)
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E641_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07638.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_44586_45
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50178..52820
DNA (2643bp) protein (881aa)
Glycosyl transferase family 51 n=2 Tax=Microbacterium RepID=H8E642_9MICO
Glycosyl transferase family 51 {ECO:0000313|EMBL:EIC07639.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
membrane carboxypeptidase
berkeley_reactor_200306_planktonic_scaffold_44586_46
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52817..53812
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A943_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85041.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
phosphohydrolase
berkeley_reactor_200306_planktonic_scaffold_44586_trna_2
unknown

Not on your lists

53829..53902
DNA (74bp)
transferRNA Pro
berkeley_reactor_200306_planktonic_scaffold_44586_47
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

53975..54739
DNA (765bp) protein (255aa)
HAD-superfamily hydrolase, subfamily IIB n=2 Tax=Microbacterium RepID=H8E644_9MICO
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:EIC07641.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hydrolase of the HAD superfamily
berkeley_reactor_200306_planktonic_scaffold_44586_48
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54758..55495)
DNA (738bp) protein (246aa)
GntR domain protein n=2 Tax=Microbacterium RepID=H8E645_9MICO
GntR domain protein {ECO:0000313|EMBL:EIC07642.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_44586_49
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

55599..56435
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7C1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC60001.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_44586_50
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56428..57030)
DNA (603bp) protein (201aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Thymidine kinase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E647_9MICO
tdk; thymidine kinase
berkeley_reactor_200306_planktonic_scaffold_44586_51
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57050..58525)
DNA (1476bp) protein (492aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Probable malate:quinone oxidoreductase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A937_9MICO
mqoA; dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_44586_52
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(58649..59722)
DNA (1074bp) protein (358aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AED3_9MICO
asd; aspartate-semialdehyde dehydrogenase
berkeley_reactor_200306_planktonic_scaffold_44586_53
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59869..61170)
DNA (1302bp) protein (434aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Aspartokinase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B8S8_9MICO
lysC; aspartokinase
berkeley_reactor_200306_planktonic_scaffold_44586_54
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

61293..61781
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D297A5
Uncharacterized protein {ECO:0000313|EMBL:CDK01660.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_44586_55
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61666..62550)
DNA (885bp) protein (295aa)
Membrane-bound lytic murein transglycosylase B n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E651_9MICO
Membrane-bound lytic murein transglycosylase B {ECO:0000313|EMBL:EIC07648.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
membrane-bound lytic murein transglycosylase B
berkeley_reactor_200306_planktonic_scaffold_44586_56
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(62556..63551)
DNA (996bp) protein (332aa)
Phosphate-transporting ATPase {ECO:0000256|SAAS:SAAS00042365}; EC=3.6.3.27 {ECO:0000256|SAAS:SAAS00042365};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ABC transporter related protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E652_9MICO
phosphate ABC transporter ATPase
berkeley_reactor_200306_planktonic_scaffold_44586_57
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(63564..64529)
DNA (966bp) protein (322aa)
Peptidase C60 sortase A and B n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E653_9MICO
Peptidase C60 sortase A and B {ECO:0000313|EMBL:EIC07650.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
sortase
Displaying items 31-60 of 65 in total

View Taxonomy