ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_4342_3

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(2672..4486)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 616.0
  • Bit_score: 1098
  • Evalue 0.0
ATP-dependent RNA helicase DeaD n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7D9_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 616.0
  • Bit_score: 1098
  • Evalue 0.0
deaD; superfamily II DNA and RNA helicase similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 579.0
  • Bit_score: 889
  • Evalue 3.00e-256

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1815
ATGGCCTCTGACAGCTCCACCGATCCCGTCGAGGCCGCTCCCGCGCCCGACACCCGCATCGCCGACTCCGCCGAGGCTCCGGCGGCGCCCGGATTCGCCGACCTCGGCCTCGACGCCGCGGTGCTCAAGGCGCTGAAGGACGTCGGCTACGAGACGCCGTCGGCCATCCAGGCCGCGACGATCCCGCCGCTGCTCGCGGGCCGCGACGTGCTCGGCACCGCGCAGACCGGCACCGGCAAGACGGCCGCGTTCGCGCTGCCGATCCTCTCGCAGCTCGACCTGTCGCAGAAGACGCCGCAGGCGCTCGTGCTCGCGCCGACCCGCGAGCTCGCCCTGCAGGTGTGCGAGGCGTTCGAGTCCTACGCCGGTCACCTCCGCGGCGTGCACGTGCTGCCCGTCTACGGCGGCCAGGGCTACGGGCAGCAGCTGTCGGCGCTCCGCCGCGGCGTGCACATCGTCGTCGGCACCCCCGGTCGCATCATGGACCACCTCGACAAGGGCACCCTCGACCTCTCCGAGCTGCGGTTCCTCGTGCTCGACGAGGCCGACGAGATGCTGAAGATGGGCTTCGCCGAGGACGTCGAGACGATCCTCGCCGACACCCCCGCGGGCAAGCAGGTCGCGCTGTTCTCCGCGACGATGCCCGCGCAGATCCGTCGCCTCGCCGGCACGTATCTGAAGGATGCCGAAGAGATCAACGTCAAGGCGAAGACCTCGACCGCGACCAACATCACCCAGCGCTACCTGATCGTGTCGTACCCGCAGAAGGTCGACGCGCTCACCCGCATCCTCGAGGTCGAGAACTTCGAGGGCATGATCGTCTTCACCCGCACGAAGAACGAGACCGAGACCCTCGCCGAGAAGCTGCGGGCGCGCGGATACGCCGCGGCCGCCATCAACGGCGACGTCGCGCAGGTGCAGCGCGAGCGGACCGTCAACCAGCTCAAGGACGGCAAGCTCGACATCCTCGTCGCCACCGACGTCGCCGCCCGCGGTCTCGACGTCGAGCGGATCAGCCACGTCGTCAACTTCGATCTGCCCATCGACACCGAGTCGTACGTCCACCGCATCGGCCGCACCGGCCGCGCCGGCCGCTCGGGCGACGCGATCAGCTTCGTCACGCCGCGCGAGCGCCGGATGCTCGCCTCCATCGAGAAGGCGACGCGCCAGCCCCTCACCGAGATGTCGCTGCCGAGCGCCGAGGACGTCAACGCGACGCGCCTCACCCGCTTCGACGACGCGATCACGGCGGCACTGGCCGAGACCGAGCGCATCGACCGCTTCCGCGACATCATCAACCACTACGTCACGCACCACGACGTGCCCGAGGCGGATGTCGCCGCCGCGCTCGCCGTCGTCGCGCAGGGTGAGACCCCGCTGCTGCTGGATGCGGACGCCCCCGAGCCGCGCCGCGAGCGCGCGGACCGCGGCGACCGCGGCGACCGTCCCGTCCGTGACGGTGACCGCGGTGACCGCGGCGACCGGCCCCGGCGTGAGCGCAGCGGCGGACCCACCGCCACGTACCGCATCGAGGTCGGGCGCCGTCACAAGGTCGAGCCGCGCCAGATCGTCGGTGCGCTCGCGAACGAGGGCGGCCTGCGTCGCGAGGACTTCGGCGCGATTCAGATCCGTCCCGACTTCTCGCTCGTGGAGCTGCCCGCCGACCTCCCCCGCGACACGCTCCAGCGGCTCGAGGGCACGCGGATCAGCGGCCGCCTCATCGAGATCAAGCCCGACCGGTTCCAGCGCTCCGCCAAGCGTCCGGACCGCGGCGAGCGTCCCGACCGCGGCGAGCGGCGCCCGCGCCGCGACTGA
PROTEIN sequence
Length: 605
MASDSSTDPVEAAPAPDTRIADSAEAPAAPGFADLGLDAAVLKALKDVGYETPSAIQAATIPPLLAGRDVLGTAQTGTGKTAAFALPILSQLDLSQKTPQALVLAPTRELALQVCEAFESYAGHLRGVHVLPVYGGQGYGQQLSALRRGVHIVVGTPGRIMDHLDKGTLDLSELRFLVLDEADEMLKMGFAEDVETILADTPAGKQVALFSATMPAQIRRLAGTYLKDAEEINVKAKTSTATNITQRYLIVSYPQKVDALTRILEVENFEGMIVFTRTKNETETLAEKLRARGYAAAAINGDVAQVQRERTVNQLKDGKLDILVATDVAARGLDVERISHVVNFDLPIDTESYVHRIGRTGRAGRSGDAISFVTPRERRMLASIEKATRQPLTEMSLPSAEDVNATRLTRFDDAITAALAETERIDRFRDIINHYVTHHDVPEADVAAALAVVAQGETPLLLDADAPEPRRERADRGDRGDRPVRDGDRGDRGDRPRRERSGGPTATYRIEVGRRHKVEPRQIVGALANEGGLRREDFGAIQIRPDFSLVELPADLPRDTLQRLEGTRISGRLIEIKPDRFQRSAKRPDRGERPDRGERRPRRD*