ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_44586_18

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(19467..20351)

Top 3 Functional Annotations

Value Algorithm Source
Aminotransferase class IV n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E613_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 89.5
  • Coverage: 294.0
  • Bit_score: 523
  • Evalue 7.40e-146
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:KIC60030.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 294.0
  • Bit_score: 528
  • Evalue 4.20e-147
branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 294.0
  • Bit_score: 404
  • Evalue 1.40e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGCCTGGCACTTCGCGCTGATGATCGACCCCGCCGACGTGGACGACACCCGCTCCGACTTCGCAGCGACCTTCACCGAGGTCGATCCCGCCGCCCCCGCGCTGACCGTCGGAGAGCTCAGCACGCAGCGCGGCGACGGCATCTTCGAGTCGATCGGCGTCATCGACGGTCACCCGCAGGAGGTCGAGGCGCACCTGTCCCGGCTCGCCCATTCGGCGCAGCTGTGCGACCTCCCCGTGCCCCACGCGGAGCAATGGCGCCAGGCCGTGGCCCTCGCCGCGTCCGCCTGCGGTGCGGGGGAGGCGGTCATCAAGCTCATCCTGAGCCGGGGAATCGAGCACGGTCCCACTCCGACCGCGTGGGTGACCGCGGCCCCGGCCGCCGACTTCTCGATCGCGCGGTCGCGCGGCATCCGTGTCGTCACCCTCGACCGCGGGTACGCCCTCGACGTGCCGTCGCGGGCGCCGTGGCTGCTGTTGGGCGCGAAGACGCTGTCGTACGCCGTGAACATGGCGGCGCTGCGCGAGGCCCGCCGGCGCGGCGCGGACGACGCAATCTTCACGACGAGCGACGGCTACGTGCTGGAGGCGCCGACCGCGTCGCTCATCCTGCGCCGCGGAGATGCCTTCCTGACCCCCGCGCCGAACGCCGGCATCCTGCACGGCACGACGCAGCTGAGCCTGTTCGAGCACCTCGCCGCCCAGGGCTTCGAAACCGGTTACGAGACGATCCCCGTGGCGGAGCTGCACACCGTGGATGCCGCGTGGCTCGTCTCCAGCGTGCGCCTCGCGGCGCCGATCACGGCGATCGACGATGTCGACGTGCCGATGGATGCCGCTCTCACGGCATCCATGAACGACTACCTGCTGAGTCCGCGGGACTGA
PROTEIN sequence
Length: 295
MAWHFALMIDPADVDDTRSDFAATFTEVDPAAPALTVGELSTQRGDGIFESIGVIDGHPQEVEAHLSRLAHSAQLCDLPVPHAEQWRQAVALAASACGAGEAVIKLILSRGIEHGPTPTAWVTAAPAADFSIARSRGIRVVTLDRGYALDVPSRAPWLLLGAKTLSYAVNMAALREARRRGADDAIFTTSDGYVLEAPTASLILRRGDAFLTPAPNAGILHGTTQLSLFEHLAAQGFETGYETIPVAELHTVDAAWLVSSVRLAAPITAIDDVDVPMDAALTASMNDYLLSPRD*