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berkeley_reactor_200306_planktonic_scaffold_44586_21

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(22117..22716)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ASF4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 199.0
  • Bit_score: 376
  • Evalue 9.90e-102
RNA polymerase sigma factor SigK {ECO:0000313|EMBL:KIC60028.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 199.0
  • Bit_score: 377
  • Evalue 1.10e-101
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 198.0
  • Bit_score: 269
  • Evalue 6.30e-70

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGCTGAGAGAGATGGTCATCGACGGTGTGGACGTACCCGAGGACTCACCGGCGCGTGATCACGCCGGGGAGCTCCTGGTGCGCATCGCGGCGGGCGACCGGACGGCTTTCGGGCAGCTCTACGACATGCTCGCCCCCCGCGCCTTCGGTCTGATCCTGCGGGTGCTCGTGAACCGCGCGCTGAGCGAGGAAGTGCTTCAAGACGTCTTCCTGGAAGTGTGGCAATCCGCTTCCGGTTTCGCTCCGAATAAGGGTCAGGGACGGTCCTGGGTCCTCACCATCGCCCATCGTCGCGCTGTCGATCGCGTGCGCTCCACACGCGCAAGCACGGAGCGAGACGAGAAGGCGGGTCTGCGCGAACTGAACACGGGCCAGGACAGCGTCGACGACCAGGTCGCCCTGCGCATCGAGAGCAGGCGCGTCGCCCGGGCGATGGACGCACTCCCCGACCCTCAGCGAGAAGCGCTGCTGCTCGCTTATGTCGGGGGATATTCTCAGAGCGAGATCGCCGCGTTGGTGGGATCGCCCCTGGGGACGATCAAGACGAGAATGCGCGACGGTCTGTCGCGCCTGAGGCAGGAGATGGGGGTGACGTCATGA
PROTEIN sequence
Length: 200
MLREMVIDGVDVPEDSPARDHAGELLVRIAAGDRTAFGQLYDMLAPRAFGLILRVLVNRALSEEVLQDVFLEVWQSASGFAPNKGQGRSWVLTIAHRRAVDRVRSTRASTERDEKAGLRELNTGQDSVDDQVALRIESRRVARAMDALPDPQREALLLAYVGGYSQSEIAALVGSPLGTIKTRMRDGLSRLRQEMGVTS*