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berkeley_reactor_200306_planktonic_scaffold_146823_19

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(18453..19628)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5C8_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 391.0
  • Bit_score: 637
  • Evalue 6.10e-180
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EIC08067.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 391.0
  • Bit_score: 637
  • Evalue 8.60e-180
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 396.0
  • Bit_score: 274
  • Evalue 3.90e-71

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1176
ATGTCCACGATCGTCCGGGCCGCCGACGCGGCACAGTTCCTGTCCGTCCTCCCGCACATGCTGGGGTGCACACCGCACGACAGCGTCGTGGTCGTTCCGCTGGCGCAGGGGCGGAGCCGCGGCGTCCTGCGCGTCGATCTCCCATCCGAGGAGGCGGCCGCCGGCGCCGCGGCCAGCATCATCGGCATGGCCTGCCGCATCGCCGAGGTGGAGACCGTGATGATCGTCGTCTACACGGATGCCGAGATCAGCGCGGATGCCGCGGACGGGGAAGGGGCGGCGGCCGACGGCGGCGCGCGATCCGCGGGTGCACTGCCGCACCGTCCGGTCGTCGATGCGCTCCTGAACCGCGCCGACGACTGCGGACTCCCGGTCGGCGATGCGTTGATCGTCGCGGCGAACGGCTGGGGTTCGGCGCGAGCCGACGGCCTGCCGCCCGGCGGTCACCCGCTGGCCGCCATCGCGCCGCGCGACGACCTGCCCGCGGAGGCCGTCGACGGTCCGCTCGCCGCGGATCAGGCCGCGGGAGCGCGGCTGCCCCTCCCCGGCGTCACCCGGCGACGCGCCGTCGGGCAGGCGCTGCGCTCGCTCGACGCGGCCCTCGAGACCCTCTGCGGCATCCCTCGGGTGAGCGGATCCGCTCCCTCCCGTATCGACCCCGCCGCGCTGCAGGCGGCGTGCGCGCTCGACGACCTGCCGGCCCTGTTCGAACGCGCACTGTCGTGGAACGCCGAGGATCTCGCACCGATGGATGCCGCGATGCTCGGCTGGTGCTTCGCACGTCCCGCGCTGCGCGATGTCGCGCTGGTCCAGTGGGCGAGCGACGTCGACGGCGGCGACGCGGCGATGGAGGCGCAACGGCGCTGGGAGGACGGCGAGGAGTACCCGAGCGATCTCGCGGAGGTGATGTGGGGCGACGGACCCCGCCCGGATCCCGTACGCCTCGACACGGCGCTGCGCCTGGCGCGCGCGGTGGCGGCGGTCATGCCGAAGAAGCGGCGCGCGGGGGCTCTCGCGGTGTGCGGCTGGATCGCGTGGGCCCGCGGCCGCTCGACGCACGCGGAGGCGTACATCCGGCAGGCGCTGCACGCTGAGCCGCGGCACGGGCTCGCGGAGATCGTCGGCTCTTTCGTCACCGCGGGCCATCTGCCCGACTGGGCGTTCCGTGCGCGGTAG
PROTEIN sequence
Length: 392
MSTIVRAADAAQFLSVLPHMLGCTPHDSVVVVPLAQGRSRGVLRVDLPSEEAAAGAAASIIGMACRIAEVETVMIVVYTDAEISADAADGEGAAADGGARSAGALPHRPVVDALLNRADDCGLPVGDALIVAANGWGSARADGLPPGGHPLAAIAPRDDLPAEAVDGPLAADQAAGARLPLPGVTRRRAVGQALRSLDAALETLCGIPRVSGSAPSRIDPAALQAACALDDLPALFERALSWNAEDLAPMDAAMLGWCFARPALRDVALVQWASDVDGGDAAMEAQRRWEDGEEYPSDLAEVMWGDGPRPDPVRLDTALRLARAVAAVMPKKRRAGALAVCGWIAWARGRSTHAEAYIRQALHAEPRHGLAEIVGSFVTAGHLPDWAFRAR*