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berkeley_reactor_200306_planktonic_scaffold_147250_4

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(2778..4394)

Top 3 Functional Annotations

Value Algorithm Source
Dipeptide ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XN04_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 74.7
  • Coverage: 542.0
  • Bit_score: 784
  • Evalue 4.30e-224
Dipeptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAD34465.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.7
  • Coverage: 542.0
  • Bit_score: 784
  • Evalue 6.00e-224
ABC-type dipeptide/oligopeptide transport system similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 533.0
  • Bit_score: 701
  • Evalue 1.00e-199

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1617
ATGTCCCTCACCAGATCACGCGCAGCGTCGATCGGCGTCGCCGGCGGAGCACTCGCCCTCGCGCTCACCGCGTGCGCCGGCGGCACCCCGGCGGCCGATCCCACCGCGTCATCGGCCAGCGCCGTGCCCGGCGGAAACCTCACGTTCGCGATCTCCGTCGACAGCCAGTGCATCGACCCGCAGCAGGTCGGCAACAACGACGCGATCGCCATCGCGCGCCAGACCGTCGCCTCCCTCACGACCCAGGACCCGCAGACCGGCGACATCCTCCCGTGGATCGCGCAGTCGTGGAAGGTCAACGACGACGCGACGAGCTTCACCTTCACGCTGCGTGGCGGCGCCACCTACGCCGACGGCGCCCCCATCGACGCGGCATCCGTCAAGACCAACTTCGAGGCCATCCAGGCCCTCGGCGCCAAAGCGACCCTCGGGTCCTCCTACCTCGCCGGGCTGAAGAGCATCGAGGTACCCGACGCGAGCACCGTCGTCATCGACTTCTCCGCGCCCAGCGCGCAGTTCCTGCAGGCGACGTCGACCTTCACGCTCGGGCTGCTCTCGCCCGCGACCGCGTCCGTCAGCCAGGCGGACCGCTGCCTCGGGAAGTACGTCGGCTCGGGACCGTTCTCGGTCAAGAGCTACACCCCCAACCAGGGCGCCGTGCTCGAGCGCCGGGCGGGCTACGACTGGGCGCCGCCCACCGCCGCGCACAGCGGAGACGCGTACCTGGACACCATCACCTACGTCGTGATCCCCGAGTCGGGCAACCGTACCGGCAGCCTGCAGTCCGGTCAGATCGACGCGACCACGGGCATCGCGACGACGGACGCGCCCCTCTTCCAGACCGCCGACTTCTGGTCCCACAACCGCGCCAACCCCGGAGTGGTCTACAACCTGTACGCGAACCAGTCGACCCCGAAGCTCGCGGACGTCTCCGTGCGGCAGGCGATCCAGAAGGGGATCGACCGCGAGCAGATCACGTCGTCGCTGCTCGGACCCGACGACAAGCCCGCGGTGTCGCCGCTGTCCTCGTCCACGCCGTACTTCACCGACCTGAGCGCCGAGCTCGTGTACGACCCGGATGCCGCGAAGAAGCTCCTCGACGCGGACGGCTGGACCGTCGGTTCCGACGGCATCCGGGAGAAGAACGGCGAGAAGCTGAGCTTCCTCGTGACGTACTGGCAGTCGCCGAAGGAGGTCCTCGAGCTCGTGCAGCAGCAGCTTCGGCAGATCGGTGTCGACCTCCAGCTGAAGTTCGCCTCCATCGCCGACGTGCAGGCGGCCCAGGCGGACGGCGACTACGACTTCAGCTACGGGAACCTGACGCGCGCCGACCCCGACGTGCTGCGGACCGTCTTCTCCTCGCAGGGGACCAACAACGCGACCAAGCGGACGGCCGTCGAGCCGATCGACGAGCTGCTGGCCCAGCAGGCGGCGACCACCGACCGCGCCCAGCGGCAGAAGCTCGTGGACGAGGCCGCGACCCTGCTCGTCACGGACGCCTCCTCCATCCCGATCTACCAGCTGTCGACGACCATCACGGCATCCGCGAAGGTGCACGACCTGACGTTCGAGGCGTCGAGCCGCCTCGACTTCTACGACGCCTGGGTCACCCCGTGA
PROTEIN sequence
Length: 539
MSLTRSRAASIGVAGGALALALTACAGGTPAADPTASSASAVPGGNLTFAISVDSQCIDPQQVGNNDAIAIARQTVASLTTQDPQTGDILPWIAQSWKVNDDATSFTFTLRGGATYADGAPIDAASVKTNFEAIQALGAKATLGSSYLAGLKSIEVPDASTVVIDFSAPSAQFLQATSTFTLGLLSPATASVSQADRCLGKYVGSGPFSVKSYTPNQGAVLERRAGYDWAPPTAAHSGDAYLDTITYVVIPESGNRTGSLQSGQIDATTGIATTDAPLFQTADFWSHNRANPGVVYNLYANQSTPKLADVSVRQAIQKGIDREQITSSLLGPDDKPAVSPLSSSTPYFTDLSAELVYDPDAAKKLLDADGWTVGSDGIREKNGEKLSFLVTYWQSPKEVLELVQQQLRQIGVDLQLKFASIADVQAAQADGDYDFSYGNLTRADPDVLRTVFSSQGTNNATKRTAVEPIDELLAQQAATTDRAQRQKLVDEAATLLVTDASSIPIYQLSTTITASAKVHDLTFEASSRLDFYDAWVTP*